OLDERADO

OLDERADO cluster and domain composition for PDB entry 2JGW

Structure of CCP module 7 of complement factor H - The AMD at risk varient (402H)
Summary of Olderado results
Most representative model 6
Largest domain comprises residues Chain A: 408-414, 427-441
RMSD of all models in ensemble (Cα atoms) 1.3 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 408-414, 427-441 39.3 % 39.3 %
2 Chain A: 417-423, 442-445 19.6 % 58.9 %
3 Chain A: 388-394 12.5 % 71.4 %
4 Chain A: 403-407 8.9 % 80.4 %
5 Chain A: 399-402 7.1 % 87.5 %
6 Chain A: 396-398 5.4 % 92.9 %
7 Chain A: 415-416 3.6 % 96.4 %
8 Chain A: 425-426 3.6 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 6 1, 2, 3, 4, 6, 8, 9, 12, 13, 14, 15, 16, 17, 18
2 10 7, 10, 11
 
List of outliers (subfamily with one member): 5, 19, 20