OLDERADO cluster and domain composition for PDB entry 1U5M
Structure of a Chordin-like Cysteine-rich Repeat (VWC module) from Collagen IIA
| Summary of Olderado results | |
|---|---|
| Most representative model | 2 |
| Largest domain comprises residues | Chain A: 9-42 |
| RMSD of all models in ensemble (Cα atoms) | 6.5 Å |
| Protein domains shown as surfaces | Representative models from each cluster |
|---|---|
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| Domain composition (NMRCore) | ||||
|---|---|---|---|---|
| Domain number and colour code | Residues | Core | Cumulative core | |
| 1 | Chain A: 9-42 | 64.2 % | 64.2 % | |
| 2 | Chain A: 52-66 | 28.3 % | 92.5 % | |
| 3 | Chain A: 43-46 | 7.5 % | 100.0 % | |
| Cluster identification (NMRClust) | |||
|---|---|---|---|
| Cluster number and colour code | Representative | Members | |
| 1 | 2 | 2, 8, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 20 | |
| 2 | 7 | 3, 5, 7 | |
| 3 | 4 | 1, 4 | |
| List of outliers (subfamily with one member): | 6, 13 | ||