OLDERADO

OLDERADO cluster and domain composition for PDB entry 1U5M

Structure of a Chordin-like Cysteine-rich Repeat (VWC module) from Collagen IIA
Summary of Olderado results
Most representative model 2
Largest domain comprises residues Chain A: 9-42
RMSD of all models in ensemble (Cα atoms) 6.5 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 9-42 64.2 % 64.2 %
2 Chain A: 52-66 28.3 % 92.5 %
3 Chain A: 43-46 7.5 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 2 2, 8, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 20
2 7 3, 5, 7
3 4 1, 4
 
List of outliers (subfamily with one member): 6, 13