OLDERADO

OLDERADO cluster and domain composition for PDB entry 1JH3

Solution structure of tyrosyl-tRNA synthetase C-terminal domain.
Summary of Olderado results
Most representative model 7
Largest domain comprises residues Chain A: 31-43, 72-73
RMSD of all models in ensemble (Cα atoms) 1.6 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 31-43, 72-73 17.1 % 17.1 %
2 Chain A: 44-56 14.8 % 31.8 %
3 Chain A: 11-20 11.4 % 43.2 %
4 Chain A: 24-28, 94-98 11.4 % 54.5 %
5 Chain A: 57-59, 65-66, 86-89 10.2 % 64.8 %
6 Chain A: 74-79 6.8 % 71.6 %
7 Chain A: 60-64 5.7 % 77.3 %
8 Chain A: 82-85 4.5 % 81.8 %
9 Chain A: 21-23 3.4 % 85.2 %
10 Chain A: 69-71 3.4 % 88.6 %
11 Chain A: 7-8 2.3 % 90.9 %
12 Chain A: 9-10 2.3 % 93.2 %
13 Chain A: 67-68 2.3 % 95.4 %
14 Chain A: 80-81 2.3 % 97.7 %
15 Chain A: 92-93 2.3 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 7 4, 5, 7, 9, 10, 11, 15, 18, 19
2 8 2, 6, 8, 12, 13, 14, 17, 20
3 3 1, 3
 
List of outliers (subfamily with one member): 16