OLDERADO

OLDERADO cluster and domain composition for PDB entry 1J1H

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus
Summary of Olderado results
Most representative model 1
Largest domain comprises residues Chain A: 3-3, 5-63, 78-94, 97-121
RMSD of all models in ensemble (Cα atoms) 2.6 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 3-3, 5-63, 78-94, 97-121 95.3 % 95.3 %
2 Chain A: 71-73 2.8 % 98.1 %
3 Chain A: 67-68 1.9 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 1 1, 3, 4, 5, 6, 7, 8, 10, 11
 
List of outliers (subfamily with one member): 2, 9