OLDERADO

OLDERADO cluster and domain composition for PDB entry 1IYF

Solution structure of ubiquitin-like domain of human parkin
Summary of Olderado results
Most representative model 3
Largest domain comprises residues Chain A: 1-8, 12-24, 43-45, 51-69
RMSD of all models in ensemble (Cα atoms) 1.9 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 1-8, 12-24, 43-45, 51-69 59.7 % 59.7 %
2 Chain A: 25-39 20.8 % 80.5 %
3 Chain A: 46-50 6.9 % 87.5 %
4 Chain A: 72-75 5.6 % 93.0 %
5 Chain A: 40-42 4.2 % 97.2 %
6 Chain A: 70-71 2.8 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 3 2, 3, 4, 7, 8, 9, 10
2 6 1, 6
 
List of outliers (subfamily with one member): 5