OLDERADO

OLDERADO cluster and domain composition for PDB entry 1GBR

ORIENTATION OF PEPTIDE FRAGMENTS FROM SOS PROTEINS BOUND TO THE N-TERMINAL SH3 DOMAIN OF GRB2 DETERMINED BY NMR SPECTROSCOPY
Summary of Olderado results
Most representative model 24
Largest domain comprises residues A.1-A.29, A.36-A.57
RMSD of all models in ensemble (Cα atoms) 5.4 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 A.1-A.29, A.36-A.57 91.1 % 91.1 %
2 A.33-A.35 5.4 % 96.4 %
3 B.8-B.9 3.6 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 24 12, 15, 19, 20, 21, 22, 23, 24, 25, 27, 28, 29
2 3 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
3 26 16, 17, 26
4 18 13, 18
 
List of outliers (subfamily with one member): 14