7yxj

X-ray diffraction
2.45Å resolution

Drosophila melanogaster JMJD7 (dmJMJD7) in complex with Mn and 2,4-PDCA

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
JmjC domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 322 amino acids
Theoretical weight: 36.71 KDa
Source organism: Drosophila melanogaster
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9VU77 (Residues: 1-316; Coverage: 100%)
Gene names: CG10133, Dmel\CG10133, Dmel_CG10133, JMJD7
Sequence domains: Cupin-like domain

Ligands and Environments

1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: P21
Unit cell:
a: 53.557Å b: 65.762Å c: 206.957Å
α: 90° β: 97.78° γ: 90°
R-values:
R R work R free
0.207 0.206 0.23
Expression system: Escherichia coli BL21(DE3)