7mzh

X-ray diffraction
2.1Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-209843 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (5 distinct):
Spike protein S1 Chains: A, E
Molecule details ›
Chains: A, E
Length: 205 amino acids
Theoretical weight: 23.07 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 331-527; Coverage: 16%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
WCSL 119 heavy chain Chains: B, H
Molecule details ›
Chains: B, H
Length: 221 amino acids
Theoretical weight: 23.77 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
WCSL 119 light chain Chains: C, L
Molecule details ›
Chains: C, L
Length: 216 amino acids
Theoretical weight: 22.97 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, BMA, MAN, FUC
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Spacegroup: P21
Unit cell:
a: 93.704Å b: 72.833Å c: 103.988Å
α: 90° β: 90.71° γ: 90°
R-values:
R R work R free
0.222 0.22 0.265
Expression system: Homo sapiens