› 7k16

X-ray diffraction
2.1Å resolution

Tamana Bat Virus xrRNA1

Released:
DOI: 10.2210/pdb7k16/pdb
PDB entry 7k16 coloured by chain, front view.
PDB entry 7k16 coloured by chain, side view.
PDB entry 7k16 coloured by chain, top view.
Source organism: Tamana bat virus
Primary publication:
Different tertiary interactions create the same important 3D features in a distinct flavivirus xrRNA.
Jones RA, Steckelberg AL, Vicens Q, Szucs MJ, Akiyama BM, Kieft JS
RNA 27 54-65 (2021)
PMID: 33004436

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197260 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (51-MER) Chain: P
Molecule details ›
Chain: P
Length: 51 nucleotides
Theoretical weight: 16.39 KDa
Source organism: Tamana bat virus
Expression system: Not provided

Ligands and Environments

2 bound ligands:
Ligand MG 5 x MG
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 4.2.2
Spacegroup: P3121
Unit cell:
a: 79.1Å b: 79.1Å c: 40.69Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.192 0.187 0.246
Expression system: Not provided

Quick links

Citations

2 review citations

Information Encoded by the Flavivirus Genomes beyond the Nucleotide Sequence.
Ramos-Lorente et al. (2021)
1 more

7 mentions without citation

Shared properties and singularities of exoribonuclease-resistant RNAs in viruses.
Vicens et al. (2021)
6 more