X-ray diffraction
1.7Å resolution

Structural and functional characterization of bovine G1P[5] rotavirus VP8* protein

Source organism: Rotavirus A
Entry authors: Duan Z, Sun X

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Outer capsid protein VP8* Chains: A, B
Molecule details ›
Chains: A, B
Length: 161 amino acids
Theoretical weight: 18.09 KDa
Source organism: Rotavirus A
Expression system: Escherichia phage Ecwhy_1
  • Canonical: Q8JNB4 (Residues: 64-224; Coverage: 21%)
Sequence domains: Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: I212121
Unit cell:
a: 97.753Å b: 102.364Å c: 137.722Å
α: 90° β: 90° γ: 90°
R R work R free
0.168 0.167 0.188
Expression system: Escherichia phage Ecwhy_1