7d03

Electron Microscopy
3.2Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-101059 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (4 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1283 amino acids
Theoretical weight: 142.5 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1273; Coverage: 100%)
Gene names: 2, S
Sequence domains:
Ig-like domain-containing protein; Immunoglobulin heavy variable 4-61 Chain: H
Molecule details ›
Chain: H
Length: 458 amino acids
Theoretical weight: 50.22 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: A0A0C4DH41 (Residues: 20-118; Coverage: 100%)
  • Canonical: V9HW68 (Residues: 118-118, 119-470; Coverage: 78%)
Gene names: HEL-214, IGHV4-61
Sequence domains:
Ig-like domain-containing protein Chain: L
Molecule details ›
Chain: L
Length: 217 amino acids
Theoretical weight: 22.8 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: Q6IPQ0 (Residues: 20-26, 131-236; Coverage: 52%)
  • Canonical: A0A5C2G2G8 (Residues: 8-111; Coverage: 94%)
Gene name: IGL@
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-30524
Expression system: Homo sapiens