7asa

Electron Microscopy
3.5Å resolution

Bacillus subtilis ribosome-associated quality control complex state B, multibody refinement focussed on RqcH. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-128579 (preferred)
Entry contents:
3 distinct polypeptide molecules
2 distinct RNA molecules
Macromolecules (5 distinct):
Rqc2 homolog RqcH Chain: 0
Molecule details ›
Chain: 0
Length: 597 amino acids
Theoretical weight: 68.34 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
Expression system: Bacillus subtilis subsp. subtilis str. 168
UniProt:
  • Canonical: O34693 (Residues: 1-570; Coverage: 100%)
Gene names: BSU15640, rqcH, yloA
Sequence domains:
Uncharacterized protein YabO Chain: 1
Molecule details ›
Chain: 1
Length: 86 amino acids
Theoretical weight: 9.74 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
UniProt:
  • Canonical: P37557 (Residues: 1-86; Coverage: 100%)
Gene names: BSU00590, yabO
Sequence domains: S4 domain
Large ribosomal subunit protein uL11 Chain: K
Molecule details ›
Chain: K
Length: 141 amino acids
Theoretical weight: 14.95 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
UniProt:
  • Canonical: Q06796 (Residues: 1-141; Coverage: 100%)
Gene names: BSU01020, relC, rplK, tsp6
Sequence domains:
tRNA-Ala-1-1 Chain: 2
Molecule details ›
Chain: 2
Length: 76 nucleotides
Theoretical weight: 24.49 KDa
Sequence domains: tRNA
23S ribosomal RNA Chain: A
Molecule details ›
Chain: A
Length: 2926 nucleotides
Theoretical weight: 949.01 KDa
Sequence domains: Bacterial large subunit ribosomal RNA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-11891
Expression system: Bacillus subtilis subsp. subtilis str. 168