› 7arz

X-ray diffraction
2.15Å resolution

Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens

Released:
DOI: 10.2210/pdb7arz/pdb
PDB 7arz coloured by chain and viewed from the front.
PDB 7arz coloured by chain and viewed from the side.
PDB 7arz coloured by chain and viewed from the top.
Source organism: Physcomitrium patens
Entry authors: Goryaynova DA, Nikolaeva AY, Pometun AA, Savin SS, Parshin PD, Popov VO, Tishkov VI, Boyko KM

Function and Biology Details

Reaction catalysed: 
Formate + NAD(+) = CO(2) + NADH
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Formate dehydrogenase, mitochondrial Chain: A
Molecule details ›
Chain: A
Length: 361 amino acids
Theoretical weight: 39.72 KDa
Source organism: Physcomitrium patens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A9SQZ2 (Residues: 43-402; Coverage: 90%)
Gene names: PHYPADRAFT_214795, PHYPA_020821
Sequence domains:

Ligands and Environments

2 bound ligands:
Ligand NAD 1 x NAD
Ligand AZI 2 x AZI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P3221
Unit cell:
a: 68.36Å b: 68.36Å c: 203.44Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.208 0.206 0.257
Expression system: Escherichia coli BL21(DE3)

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