› › Structure analysis

Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine D-syn-1b

X-ray diffraction
1.7Å resolution
PDB entry 6zyq coloured by chain, front view.
PDB entry 6zyq coloured by chain, side view.
PDB entry 6zyq coloured by chain, top view.
Source organism: Klebsiella pneumoniae
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Assembly Name: Metallo-beta-lactamase type 2
hide full assembly name
Multimeric state: monomeric
Accessible surface area: 10226.38 Å2
Buried surface area: 323.99 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-111680
Assembly 2
Download    3D Visualisation
Assembly Name: Metallo-beta-lactamase type 2
hide full assembly name
Multimeric state: monomeric
Accessible surface area: 168.3 Å2
Buried surface area: 27.34 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 4
PDBe Complex ID: PDB-CPX-111680

Macromolecules

Metallo-beta-lactamase type 2
Chains: A, B
Length: 244 amino acids
Theoretical weight: 25.78 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: C7C422 (Residues: 29-270; Coverage: 100%)
Gene name: blaNDM-1
Pfam: Metallo-beta-lactamase superfamily
InterPro:
Metallo-beta-lactamase type 2 in PDB entry 6zyq, assembly 1, front view.
Metallo-beta-lactamase type 2 in PDB entry 6zyq, assembly 1, side view.
Metallo-beta-lactamase type 2 in PDB entry 6zyq, assembly 1, top view.
Molecule details ›

Search similar proteins

Quick links