› 6ztu

X-ray diffraction
1.69Å resolution

Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans

Released:
DOI: 10.2210/pdb6ztu/pdb
PDB 6ztu coloured by chain and viewed from the front.
PDB 6ztu coloured by chain and viewed from the side.
PDB 6ztu coloured by chain and viewed from the top.
Source organism: Caldibacillus thermoamylovorans
Primary publication:
Bypassing the requirement for aminoacyl-tRNA by a cyclodipeptide synthase enzyme.
Harding CJ, Sutherland E, Hanna JG, Houston DR, Czekster CM
RSC Chem Biol 2 230-240 (2021)
PMID: 33937777

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cyclodipeptide synthase Chain: A
Molecule details ›
Chain: A
Length: 232 amino acids
Theoretical weight: 27.26 KDa
Source organism: Caldibacillus thermoamylovorans
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A090KS30 (Residues: 1-231; Coverage: 100%)
Gene names: BT1A1_1686, yvmC
Sequence domains: Cyclodipeptide synthase

Ligands and Environments

1 bound ligand:
Ligand 0RE 1 x 0RE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P41212
Unit cell:
a: 79.969Å b: 79.969Å c: 92.073Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.19 0.212
Expression system: Escherichia coli

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