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SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunit

Source organisms:
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribosome

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EC 3.6.4.13: RNA helicase

Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (RNA helix unwinding)
Alternative Name(s):
  • CSFV NS3 helicase
  • DBP2
  • DDX17
  • DDX25
  • DDX3
  • DDX3X
  • DDX3Y
  • DDX4
  • DDX5
  • DEAD-box RNA helicase
  • DEAD-box protein DED1
  • DEAH-box RNA helicase
  • DEAH-box protein 2
  • DED1
  • DbpA
  • Dex(H/D) RNA helicase
  • EIF4A helicase
  • EhDEAD1
  • EhDEAD1 RNA helicase
  • GRTH/DDX25
  • KOKV helicase
  • Mtr4p
  • NPH-II
  • Nonstructural protein 3 helicase
  • RHA
  • RNA helicase A
  • RNA helicase DDX3
  • RNA helicase Hera
  • RNA-dependent ATPase
  • TGBp1 NTPase/helicase domain
  • VRH1

EC 3.6.4.12: DNA helicase

Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (DNA helix unwinding)
Alternative Name(s):
  • 3' to 5' DNA helicase
  • 3'-5' DNA helicase
  • 3'-5' PfDH
  • 5' to 3' DNA helicase
  • AvDH1
  • BACH1 helicase
  • BLM protein
  • BRCA1-associated C-terminal helicase
  • BcMCM
  • CeWRN-1
  • DNA helicase 120
  • DNA helicase A
  • DNA helicase E
  • DNA helicase II
  • DNA helicase III
  • DNA helicase RECQL5'
  • DNA helicase VI
  • Dbp9p
  • DmRECQ5
  • DnaB
  • DnaB helicase E1
  • HHcsA
  • HPif1
  • Hel E
  • Helicase DnaB
  • Helicase HDH IV
  • Helicase domain of bacteriophage T7 gene 4 protein helicase
  • Hmi1p
  • MCM helicase
  • MCM protein
  • MER3 helicase
  • MER3 protein
  • MPH1
  • PDH120
  • PIF1
  • PcrA
  • PcrA helicase
  • PfDH A
  • Pfh1p
  • UvrD

EC 3.4.22.69: SARS coronavirus main proteinase

Reaction catalysed:
TSAVLQ-|-SGFRK-NH(2) and SGVTFQ-|-GKFKK the two peptides corresponding to the two self-cleavage sites of the SARS 3C-like proteinase are the two most reactive peptide substrates. The enzyme exhibits a strong preference for substrates containing Gln at P1 position and Leu at P2 position.
Systematic name:
-
Alternative Name(s):
  • 3C-like protease
  • 3cLpro
  • Coronavirus 3C-like protease
  • Mpro
  • SARS 3C-like protease
  • SARS coronavirus 3CL protease
  • SARS coronavirus main peptidase
  • SARS coronavirus main protease
  • SARS-CoV 3CLpro enzyme
  • SARS-CoV Mpro
  • SARS-CoV main protease
  • Severe acute respiratory syndrome coronavirus main protease

EC 3.4.19.12: Ubiquitinyl hydrolase 1

Reaction catalysed:
Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).
Systematic name:
-
Alternative Name(s):
  • Ubiquitin C-terminal hydrolase
  • Ubiquitin carboxyl-terminal hydrolase
  • Ubiquitin thiolesterase
  • Yeast ubiquitin hydrolase

EC 2.7.7.50: mRNA guanylyltransferase

Reaction catalysed:
GTP + a 5'-diphospho-[mRNA] = diphosphate + a 5'-(5'-triphosphoguanosine)-[mRNA]
Systematic name:
GTP:mRNA guanylyltransferase
Alternative Name(s):
  • GTP--RNA guanylyltransferase
  • Messenger RNA guanylyltransferase
  • Protein lambda-2
  • mRNA capping enzyme

EC 2.7.7.48: RNA-directed RNA polymerase

Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Systematic name:
Nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)
Alternative Name(s):
  • 3D polymerase
  • PB1 proteins
  • PB2 proteins
  • Phage f2 replicase
  • Polymerase L
  • Q-beta replicase
  • RDRP
  • RNA nucleotidyltransferase (RNA-directed)
  • RNA replicase
  • RNA synthetase
  • RNA transcriptase
  • RNA-dependent RNA polymerase
  • RNA-dependent RNA replicase
  • RNA-dependent ribonucleate nucleotidyltransferase
  • Ribonucleic acid replicase
  • Ribonucleic acid-dependent ribonucleate nucleotidyltransferase
  • Ribonucleic acid-dependent ribonucleic acid polymerase
  • Ribonucleic replicase
  • Ribonucleic synthetase
  • Transcriptase

EC 2.1.1.57: Methyltransferase cap1

Reaction catalysed:
S-adenosyl-L-methionine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleotide)-[mRNA]
Systematic name:
S-adenosyl-L-methionine:5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] 2-O-methyltransferase
Alternative Name(s):
  • Cap1-MTase
  • MTR1
  • Messenger RNA (nucleoside-2'-)-methyltransferase
  • Messenger ribonucleate nucleoside 2'-methyltransferase
  • S-adenosyl-L-methionine:mRNA (nucleoside-2'-O)-methyltransferase
  • mRNA (nucleoside-2'-O)-methyltransferase

EC 2.1.1.56: mRNA (guanine-N(7))-methyltransferase

Reaction catalysed:
S-adenosyl-L-methionine + a 5'-(5'-triphosphoguanosine)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA]
Systematic name:
S-adenosyl-L-methionine:mRNA (guanine-N(7))-methyltransferase
Alternative Name(s):
  • Guanine-7-methyltransferase
  • Messenger RNA guanine 7-methyltransferase
  • Messenger ribonucleate guanine 7-methyltransferase
  • S-adenosyl-L-methionine:mRNA (guanine-7-N)-methyltransferase

EC 4.2.99.18: DNA-(apurinic or apyrimidinic site) lyase

Reaction catalysed:
The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Systematic name:
DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase
Alternative Name(s):
  • AP endonuclease class I
  • AP lyase
  • AP site-DNA 5'-phosphomonoester-lyase
  • Deoxyribonuclease (apurinic or apyrimidinic)
  • E. coli endonuclease III
  • E.coli endonuclease III
  • Endodeoxyribonuclease (apurinic or apyrimidinic)
  • Micrococcus luteus UV endonuclease
  • Phage-T(4) UV endonuclease
  • Phage-T4 UV endonuclease
  • X-ray endonuclease III

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Small ribosomal subunit protein RACK1
The deposited structure of PDB entry 6zlw contains 7 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Small ribosomal subunit protein RACK1. Showing 7 copies in chain HA [auth j].

PF00318
Domain description: Ribosomal protein S2
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 6zlw contains 2 copies of Pfam domain PF00318 (Ribosomal protein S2) in Small ribosomal subunit protein uS2. Showing 2 copies in chain A [auth B].

PF11501
Domain description: Betacoronavirus replicase NSP1
Occurring in:
  1. Host translation inhibitor nsp1
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF11501 (Betacoronavirus replicase NSP1) in Host translation inhibitor nsp1. Showing 1 copy in chain JA [auth i] (this domain is out of the observed residue ranges!).

PF05162
Domain description: Ribosomal protein L41
Occurring in:
  1. Small ribosomal subunit protein eS32
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF05162 (Ribosomal protein L41) in Large ribosomal subunit protein eL41. Showing 1 copy in chain GA [auth h].

PF01599
Domain description: Ribosomal protein S27a
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01599 (Ribosomal protein S27a) in Ubiquitin-ribosomal protein eS31 fusion protein. Showing 1 copy in chain FA [auth g].

PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin-ribosomal protein eS31 fusion protein. Showing 1 copy in chain FA [auth g] (this domain is out of the observed residue ranges!).

PF00253
Domain description: Ribosomal protein S14p/S29e
Occurring in:
  1. Small ribosomal subunit protein uS14
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in Small ribosomal subunit protein uS14. Showing 1 copy in chain EA [auth f].

PF04758
Domain description: Ribosomal protein S30
Occurring in:
  1. Small ribosomal subunit protein eS30

PF01200
Domain description: Ribosomal protein S28e
Occurring in:
  1. Small ribosomal subunit protein eS28
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01200 (Ribosomal protein S28e) in Small ribosomal subunit protein eS28. Showing 1 copy in chain CA [auth d].

PF01283
Domain description: Ribosomal protein S26e
Occurring in:
  1. Small ribosomal subunit protein eS26
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01283 (Ribosomal protein S26e) in Small ribosomal subunit protein eS26. Showing 1 copy in chain BA [auth c].

PF01667
Domain description: Ribosomal protein S27
Occurring in:
  1. Small ribosomal subunit protein eS27
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01667 (Ribosomal protein S27) in Small ribosomal subunit protein eS27. Showing 1 copy in chain AA [auth b].

PF03297
Domain description: S25 ribosomal protein
Occurring in:
  1. Small ribosomal subunit protein eS25
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF03297 (S25 ribosomal protein) in Small ribosomal subunit protein eS25. Showing 1 copy in chain Z [auth a].

PF01249
Domain description: Ribosomal protein S21e
Occurring in:
  1. Small ribosomal subunit protein eS21
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01249 (Ribosomal protein S21e) in Small ribosomal subunit protein eS21. Showing 1 copy in chain Y [auth Z].

PF01282
Domain description: Ribosomal protein S24e
Occurring in:
  1. Small ribosomal subunit protein eS24
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01282 (Ribosomal protein S24e) in Small ribosomal subunit protein eS24. Showing 1 copy in chain X [auth Y].

PF00164
Domain description: Ribosomal protein S12/S23
Occurring in:
  1. Small ribosomal subunit protein uS12
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00164 (Ribosomal protein S12/S23) in Small ribosomal subunit protein uS12. Showing 1 copy in chain W [auth X].

PF00410
Domain description: Ribosomal protein S8
Occurring in:
  1. Small ribosomal subunit protein uS8
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00410 (Ribosomal protein S8) in Small ribosomal subunit protein uS8. Showing 1 copy in chain V [auth W].

PF00338
Domain description: Ribosomal protein S10p/S20e
Occurring in:
  1. Small ribosomal subunit protein uS10
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10. Showing 1 copy in chain U [auth V].

PF01090
Domain description: Ribosomal protein S19e
Occurring in:
  1. Small ribosomal subunit protein eS19
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01090 (Ribosomal protein S19e) in Small ribosomal subunit protein eS19. Showing 1 copy in chain T [auth U].

PF00416
Domain description: Ribosomal protein S13/S18
Occurring in:
  1. Small ribosomal subunit protein uS13
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in Small ribosomal subunit protein uS13. Showing 1 copy in chain S [auth T].

PF00833
Domain description: Ribosomal S17
Occurring in:
  1. Small ribosomal subunit protein eS17
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00833 (Ribosomal S17) in Small ribosomal subunit protein eS17. Showing 1 copy in chain R [auth S].

PF00380
Domain description: Ribosomal protein S9/S16
Occurring in:
  1. Small ribosomal subunit protein uS9
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in Small ribosomal subunit protein uS9. Showing 1 copy in chain Q [auth R].

PF00203
Domain description: Ribosomal protein S19
Occurring in:
  1. Small ribosomal subunit protein uS19
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in Small ribosomal subunit protein uS19. Showing 1 copy in chain P [auth Q].

PF00411
Domain description: Ribosomal protein S11
Occurring in:
  1. Small ribosomal subunit protein uS11
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00411 (Ribosomal protein S11) in Small ribosomal subunit protein uS11. Showing 1 copy in chain O [auth P].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. Small ribosomal subunit protein eS12
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Small ribosomal subunit protein eS12. Showing 1 copy in chain N [auth O].

PF00312
Domain description: Ribosomal protein S15
Occurring in:
  1. Small ribosomal subunit protein uS15
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00312 (Ribosomal protein S15) in Small ribosomal subunit protein uS15. Showing 1 copy in chain M [auth N].

PF08069
Domain description: Ribosomal S13/S15 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS15
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF08069 (Ribosomal S13/S15 N-terminal domain) in Small ribosomal subunit protein uS15. Showing 1 copy in chain M [auth N].

PF03501
Domain description: Plectin/S10 domain
Occurring in:
  1. Small ribosomal subunit protein eS10
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF03501 (Plectin/S10 domain) in Small ribosomal subunit protein eS10. Showing 1 copy in chain L [auth M].

PF00366
Domain description: Ribosomal protein S17
Occurring in:
  1. Small ribosomal subunit protein uS17
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00366 (Ribosomal protein S17) in Small ribosomal subunit protein uS17. Showing 1 copy in chain K [auth L].

PF16205
Domain description: Ribosomal_S17 N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS17
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF16205 (Ribosomal_S17 N-terminal) in Small ribosomal subunit protein uS17. Showing 1 copy in chain K [auth L].

PF00177
Domain description: Ribosomal protein S7p/S5e
Occurring in:
  1. Small ribosomal subunit protein uS7
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7. Showing 1 copy in chain J [auth K].

PF01479
Domain description: S4 domain
Occurring in:
  1. Small ribosomal subunit protein uS4
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01479 (S4 domain) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain D [auth E].
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01479 (S4 domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain I [auth J].

PF00163
Domain description: Ribosomal protein S4/S9 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS4
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00163 (Ribosomal protein S4/S9 N-terminal domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain I [auth J].

PF01201
Domain description: Ribosomal protein S8e
Occurring in:
  1. Small ribosomal subunit protein eS8
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01201 (Ribosomal protein S8e) in Small ribosomal subunit protein eS8. Showing 1 copy in chain H [auth I].

PF01251
Domain description: Ribosomal protein S7e
Occurring in:
  1. Small ribosomal subunit protein eS7
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01251 (Ribosomal protein S7e) in Small ribosomal subunit protein eS7. Showing 1 copy in chain G [auth H].

PF01092
Domain description: Ribosomal protein S6e
Occurring in:
  1. Small ribosomal subunit protein eS6
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01092 (Ribosomal protein S6e) in Small ribosomal subunit protein eS6. Showing 1 copy in chain F [auth G].

PF00189
Domain description: Ribosomal protein S3, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS3
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain E [auth F].

PF07650
Domain description: KH domain
Occurring in:
  1. Small ribosomal subunit protein uS3
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF07650 (KH domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain E [auth F].

PF16121
Domain description: 40S ribosomal protein S4 C-terminus
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF16121 (40S ribosomal protein S4 C-terminus) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain D [auth E].

PF00467
Domain description: KOW motif
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00467 (KOW motif) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain D [auth E].

PF00900
Domain description: Ribosomal family S4e
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00900 (Ribosomal family S4e) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain D [auth E].

PF08071
Domain description: RS4NT (NUC023) domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF08071 (RS4NT (NUC023) domain) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain D [auth E].

PF03719
Domain description: Ribosomal protein S5, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF03719 (Ribosomal protein S5, C-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain C [auth D].

PF00333
Domain description: Ribosomal protein S5, N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF00333 (Ribosomal protein S5, N-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain C [auth D].

PF01015
Domain description: Ribosomal S3Ae family
Occurring in:
  1. Small ribosomal subunit protein eS1
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF01015 (Ribosomal S3Ae family) in Small ribosomal subunit protein eS1. Showing 1 copy in chain B [auth C].

PF16122
Domain description: 40S ribosomal protein SA C-terminus
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 6zlw contains 1 copy of Pfam domain PF16122 (40S ribosomal protein SA C-terminus) in Small ribosomal subunit protein uS2. Showing 1 copy in chain A [auth B].

Rfam RNA family (Rfam)
RF01960
Domain description: Eukaryotic small subunit ribosomal RNA
Occurring in:
  1. 18S Ribosomal RNA
The deposited structure of PDB entry 6zlw contains 1 copy of Rfam domain RF01960 (Eukaryotic small subunit ribosomal RNA) in 18S Ribosomal RNA. Showing 1 copy in chain IA [auth 2].

InterPro InterPro annotations
IPR001680
Domain description: WD40 repeat
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR001865
Domain description: Small ribosomal subunit protein uS2
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR002222
Domain description: Small ribosomal subunit protein uS19
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR001848
Domain description: Small ribosomal subunit protein uS10
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Small ribosomal subunit protein uS17
  2. Small ribosomal subunit protein uS12
  3. Small ribosomal subunit protein eS28
IPR000266
Domain description: Small ribosomal subunit protein uS17
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR000289
Domain description: Small ribosomal subunit protein eS28
Occurring in:
  1. Small ribosomal subunit protein eS28
IPR000592
Domain description: Small ribosomal subunit protein eS27
Occurring in:
  1. Small ribosomal subunit protein eS27
IPR006032
Domain description: Small ribosomal subunit protein uS12
Occurring in:
  1. Small ribosomal subunit protein uS12
IPR001892
Domain description: Small ribosomal subunit protein uS13
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR001971
Domain description: Small ribosomal subunit protein uS11
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR000530
Domain description: Small ribosomal subunit protein eS12
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR000589
Domain description: Small ribosomal subunit protein uS15
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR002942
Domain description: RNA-binding S4 domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
  2. Small ribosomal subunit protein uS4
IPR020472
Domain description: G-protein beta WD-40 repeat
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR019775
Domain description: WD40 repeat, conserved site
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR019956
Domain description: Ubiquitin domain
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR001931
Domain description: Small ribosomal subunit protein eS21
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR001976
Domain description: Small ribosomal subunit protein eS24
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR000630
Domain description: Small ribosomal subunit protein uS8
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR001266
Domain description: Small ribosomal subunit protein eS19
Occurring in:
  1. Small ribosomal subunit protein eS19
IPR001210
Domain description: Small ribosomal subunit protein eS17
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR036388
Domain description: Winged helix-like DNA-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS10
  2. Small ribosomal subunit protein eS19
  3. Small ribosomal subunit protein eS25
IPR000876
Domain description: Small ribosomal subunit protein eS4
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR000892
Domain description: Small ribosomal subunit protein eS26
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Small ribosomal subunit protein eS27
  2. Ubiquitin-ribosomal protein eS31 fusion protein
IPR004977
Domain description: Small ribosomal subunit protein eS25
Occurring in:
  1. Small ribosomal subunit protein eS25
IPR005680
Domain description: Small ribosomal subunit protein uS12, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS12
IPR036838
Domain description: Small ribosomal subunit protein uS10 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR000754
Domain description: Small ribosomal subunit protein uS9
Occurring in:
  1. Small ribosomal subunit protein uS9
IPR023575
Domain description: Small ribosomal subunit protein uS19, superfamily
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR023029
Domain description: Small ribosomal subunit protein uS15, archaea/eukaryotes
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR005716
Domain description: Ribosomal protein uS7, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR036823
Domain description: Small ribosomal subunit protein uS7 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR000235
Domain description: Small ribosomal subunit protein uS7
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR001912
Domain description: Small ribosomal subunit protein uS4, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR001047
Domain description: Small ribosomal subunit protein eS8
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR000554
Domain description: Small ribosomal subunit protein eS7
Occurring in:
  1. Small ribosomal subunit protein eS7
IPR001377
Domain description: Small ribosomal subunit protein eS6
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR036419
Domain description: Ribosomal protein S3, C-terminal domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR004044
Domain description: K Homology domain, type 2
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR036986
Domain description: RNA-binding S4 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
  2. Small ribosomal subunit protein uS4
IPR020568
Domain description: Ribosomal protein uS5 domain 2-type superfamily
Occurring in:
  1. Small ribosomal subunit protein uS5
  2. Small ribosomal subunit protein uS9
IPR014721
Domain description: Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
Occurring in:
  1. Small ribosomal subunit protein uS5
  2. Small ribosomal subunit protein uS9
IPR013810
Domain description: Small ribosomal subunit protein uS5, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR001593
Domain description: Small ribosomal subunit protein eS1
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR018130
Domain description: Small ribosomal subunit protein uS2, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR005707
Domain description: Small ribosomal subunit protein uS2, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR015943
Domain description: WD40/YVTN repeat-like-containing domain superfamily
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR036322
Domain description: WD40-repeat-containing domain superfamily
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR045223
Domain description: Small ribosomal subunit protein RACK1-like
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR046442
Domain description: NSP1, C-terminal domain, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR038030
Domain description: NSP1 globular domain superfamily, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR046443
Domain description: NSP1, globular domain, alpha/betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR021590
Domain description: NSP1, globular domain, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR007836
Domain description: Large ribosomal subunit protein eS32
Occurring in:
  1. Small ribosomal subunit protein eS32
IPR002906
Domain description: Small ribosomal subunit protein eS31
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR038582
Domain description: Small ribosomal subunit protein eS31 eukaryotic-type superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR019954
Domain description: Ubiquitin conserved site
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR018271
Domain description: Small ribosomal subunit protein uS14, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR001209
Domain description: Small ribosomal subunit protein uS14
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR043140
Domain description: Small ribosomal subunit protein uS14 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR039744
Domain description: Small ribosomal subunit protein uS14, eukaryotes/archaea
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR006846
Domain description: Small ribosomal subunit protein eS30
Occurring in:
  1. Small ribosomal subunit protein eS30
IPR028626
Domain description: Ribosomal protein eS28 conserved site
Occurring in:
  1. Small ribosomal subunit protein eS28
IPR047864
Domain description: Ribosomal protein eS26, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR038551
Domain description: Ribosomal protein eS26 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR023407
Domain description: Small ribosomal subunit protein eS27, zinc-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS27
IPR018279
Domain description: Small ribosomal subunit protein eS21, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR038579
Domain description: Small ribosomal subunit protein eS21 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR018098
Domain description: Small ribosomal subunit protein eS24 conserved site
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR047863
Domain description: Small ribosomal subunit protein uS8, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR035987
Domain description: Small ribosomal subunit protein uS8 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR018268
Domain description: Small ribosomal subunit protein uS10, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR027486
Domain description: Small ribosomal subunit protein uS10 domain
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR005729
Domain description: Small ribosomal subunit protein uS10, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR018277
Domain description: Small ribosomal subunit protein eS19, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS19
IPR036390
Domain description: Winged helix DNA-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS19
IPR018269
Domain description: Small ribosomal subunit protein uS13, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR027437
Domain description: Small ribosomal subunit protein uS13, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR010979
Domain description: Small ribosomal subunit protein uS13-like, H2TH
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR018273
Domain description: Small ribosomal subunit protein eS17, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR036401
Domain description: Small ribosomal subunit protein eS17 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR020574
Domain description: Small ribosomal subunit protein uS9, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS9
IPR020934
Domain description: Small ribosomal subunit protein uS19, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR005713
Domain description: Small ribosomal subunit protein uS19, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR018102
Domain description: Small ribosomal subunit protein uS11, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR036967
Domain description: Small ribosomal subunit protein uS11 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR047860
Domain description: Small ribosomal subunit protein eS12, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR009068
Domain description: uS15/NS1, RNA-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR012606
Domain description: Small ribosomal subunit protein uS15, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR005326
Domain description: Plectin/eS10, N-terminal
Occurring in:
  1. Small ribosomal subunit protein eS10
IPR037447
Domain description: Small ribosomal subunit protein eS10
Occurring in:
  1. Small ribosomal subunit protein eS10
IPR019979
Domain description: Small ribosomal subunit protein uS17, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR028333
Domain description: Small ribosomal subunit protein uS17, archaeal/eukaryotic
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR032440
Domain description: Small ribosomal subunit protein uS17, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR020606
Domain description: Small ribosomal subunit protein uS7, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR023798
Domain description: Small ribosomal subunit protein uS7 domain
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR018079
Domain description: Small ribosomal subunit protein uS4, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR022801
Domain description: Small ribosomal subunit protein uS4
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR005710
Domain description: Small ribosomal subunit protein uS4, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR042563
Domain description: Small ribosomal subunit protein eS8 subdomain, eukaryotes
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR018283
Domain description: Small ribosomal subunit protein eS8, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR022309
Domain description: Ribosomal protein eS8/ribosomal biogenesis NSA2
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR047861
Domain description: Small ribosomal subunit protein eS7, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS7
IPR018282
Domain description: Small ribosomal subunit protein eS6, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR014401
Domain description: Small ribosomal subunit protein eS6-like
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR018280
Domain description: Small ribosomal subunit protein uS3, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR001351
Domain description: Small ribosomal subunit protein uS3, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR009019
Domain description: K homology domain superfamily, prokaryotic type
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR005703
Domain description: Small ribosomal subunit protein uS3, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR015946
Domain description: K homology domain-like, alpha/beta
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR032277
Domain description: Small ribosomal subunit protein eS4, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR005824
Domain description: KOW
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR041982
Domain description: Small ribosomal subunit protein eS4, KOW domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR038237
Domain description: Small ribosomal subunit protein eS4, central domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR013845
Domain description: Small ribosomal subunit protein eS4, central region
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR018199
Domain description: Small ribosomal subunit protein eS4, N-terminal, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR013843
Domain description: Small ribosomal subunit protein eS4, N-terminal
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR005324
Domain description: Small ribosomal subunit protein uS5, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR018192
Domain description: Small ribosomal subunit protein uS5, N-terminal, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR005711
Domain description: Small ribosomal subunit protein uS5, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR000851
Domain description: Small ribosomal subunit protein uS5
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR018281
Domain description: Small ribosomal subunit protein eS1, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR027500
Domain description: Small ribosomal subunit protein eS1, eukaryotes
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR032281
Domain description: Small ribosomal subunit protein uS2, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR023591
Domain description: Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR027498
Domain description: Small ribosomal subunit protein uS2, eukaryotic
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR027504
Domain description: Small ribosomal subunit protein uS2, vertebrates
Occurring in:
  1. Small ribosomal subunit protein uS2

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