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lipopolysaccharide outer core galactosyltransferase WaaB and UDP complex

X-ray diffraction
1.92Å resolution
PDB entry 6y6i coloured by chain, front view.
PDB entry 6y6i coloured by chain, side view.
PDB entry 6y6i coloured by chain, top view.
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Lipopolysaccharide 1,6-galactosyltransferase
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Multimeric state: monomeric
Accessible surface area: 15791.57 Å2
Buried surface area: 535.82 Å2
Dissociation area: 267.91 Å2
Dissociation energy (ΔGdiss): 1.1 kcal/mol
Dissociation entropy (TΔSdiss): 4.76 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-170414

Macromolecules

Lipopolysaccharide 1,6-galactosyltransferase
Chain: A
Length: 361 amino acids
Theoretical weight: 41.07 KDa
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q06994 (Residues: 1-359; Coverage: 100%)
Gene names: STM3719, rfaB, waaB
Pfam: Glycosyl transferases group 1
InterPro:
Lipopolysaccharide 1,6-galactosyltransferase in PDB entry 6y6i, assembly 1, front view.
Lipopolysaccharide 1,6-galactosyltransferase in PDB entry 6y6i, assembly 1, side view.
Lipopolysaccharide 1,6-galactosyltransferase in PDB entry 6y6i, assembly 1, top view.
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