› 6y6i

X-ray diffraction
1.92Å resolution

lipopolysaccharide outer core galactosyltransferase WaaB and UDP complex

Released:
DOI: 10.2210/pdb6y6i/pdb
PDB 6y6i coloured by chain and viewed from the front.
PDB 6y6i coloured by chain and viewed from the side.
PDB 6y6i coloured by chain and viewed from the top.
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Entry authors: Zhang ZY, Ashworth G, Wang ZS, Zhu XF, Dong CJ

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipopolysaccharide 1,6-galactosyltransferase Chain: A
Molecule details ›
Chain: A
Length: 361 amino acids
Theoretical weight: 41.07 KDa
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q06994 (Residues: 1-359; Coverage: 100%)
Gene names: STM3719, rfaB, waaB
Sequence domains: Glycosyl transferases group 1

Ligands and Environments

1 bound ligand:
Ligand UDP 1 x UDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P43212
Unit cell:
a: 104.44Å b: 104.44Å c: 89.64Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.166 0.164 0.213
Expression system: Escherichia coli

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