› 6xlp

X-ray diffraction
2Å resolution

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-142311 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Inner membrane protein YejM Chain: A
Molecule details ›
Chain: A
Length: 596 amino acids
Theoretical weight: 68.49 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P0AD27 (Residues: 1-586; Coverage: 100%)
Gene names: JW2176, b2188, yejM, yejN
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: VJ4, VJ1, KDO
Ligand VJ4 1 x VJ4
Ligand VJ1 1 x VJ1
Ligand KDO 1 x KDO
4 bound ligands:
Ligand SO4 8 x SO4
Ligand OLB 8 x OLB
Ligand PG4 3 x PG4
Ligand 3PE 1 x 3PE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: C2
Unit cell:
a: 171.272Å b: 56.328Å c: 97.359Å
α: 90° β: 106.45° γ: 90°
R-values:
R R work R free
0.194 0.193 0.211
Expression system: Escherichia coli

Quick links

Citations

10 review citations

Assembly and Maintenance of Lipids at the Bacterial Outer Membrane.
Lundstedt et al. (2021)
9 more

2 mentions without citation

Regulatory mechanisms of lipopolysaccharide synthesis in Escherichia coli.
Shu et al. (2022)
1 more