6wv9

X-ray diffraction
3.35Å resolution

Takifugu rubripes VKOR-like with vitamin K1 in noncatalytic state

Released:

Function and Biology Details

Reaction catalysed:
Phylloquinol + a protein with a disulfide bond = phylloquinone + a protein with reduced L-cysteine residues
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Green fluorescent protein; Vitamin K epoxide reductase complex subunit 1-like protein 1 Chain: A
Molecule details ›
Chain: A
Length: 414 amino acids
Theoretical weight: 46.78 KDa
Source organisms: Expression system: Komagataella pastoris
UniProt:
  • Canonical: Q6TEK8 (Residues: 7-175; Coverage: 97%)
  • Canonical: P42212 (Residues: 1-145, 146-238; Coverage: 100%)
Gene names: GFP, vkorc1l1
Sequence domains:

Ligands and Environments

No bound ligands
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: C2
Unit cell:
a: 153.73Å b: 49.321Å c: 84.473Å
α: 90° β: 112.69° γ: 90°
R-values:
R R work R free
0.225 0.222 0.282
Expression system: Komagataella pastoris