6vz3

Electron Microscopy
8.9Å resolution

Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer

Released:
Source organism: Escherichia coli
Related structures: EMD-21483

Function and Biology Details

Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 65-mer (preferred)
Entry contents:
55 distinct polypeptide molecules
2 distinct DNA molecules
6 distinct RNA molecules
Macromolecules (63 distinct):
50S ribosomal protein L21 Chain: 0
Molecule details ›
Chain: 0
Length: 103 amino acids
Theoretical weight: 11.59 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7ZEN7 (Residues: 1-103; Coverage: 100%)
Gene names: HMPREF9534_02716, rplU
Sequence domains: Ribosomal prokaryotic L21 protein
50S ribosomal protein L22 Chain: 1
Molecule details ›
Chain: 1
Length: 110 amino acids
Theoretical weight: 12.25 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7Z9G0 (Residues: 1-110; Coverage: 100%)
Gene names: HMPREF9534_00853, rplV
Sequence domains: Ribosomal protein L22p/L17e
50S ribosomal protein L23 Chain: 2
Molecule details ›
Chain: 2
Length: 94 amino acids
Theoretical weight: 10.66 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D6I208 (Residues: 1-94; Coverage: 94%)
Gene names: ECCG_03724, rplW
50S ribosomal protein L24 Chain: 3
Molecule details ›
Chain: 3
Length: 103 amino acids
Theoretical weight: 11.21 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7XKZ6 (Residues: 2-104; Coverage: 99%)
Gene names: HMPREF9536_01686, rplX
Sequence domains:
50S ribosomal protein L25 Chain: 4
Molecule details ›
Chain: 4
Length: 94 amino acids
Theoretical weight: 10.71 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7XH79 (Residues: 1-94; Coverage: 100%)
Gene names: HMPREF9536_00351, rplY
Sequence domains: Ribosomal L25p family
DNA-directed RNA polymerase subunit beta Chain: AA
Molecule details ›
Chain: AA
Length: 1342 amino acids
Theoretical weight: 150.82 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P0A8V4 (Residues: 1-1342; Coverage: 100%)
Gene names: ECs4910, Z5560, rpoB
Sequence domains:
Transcription termination/antitermination protein NusG Chain: AB
Molecule details ›
Chain: AB
Length: 112 amino acids
Theoretical weight: 12.93 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A4V3VM65 (Residues: 6-117; Coverage: 62%)
Gene names: E2148_24035, nusG
Sequence domains: Transcription termination factor nusG
DNA-directed RNA polymerase subunit alpha Chains: AC, AD
Molecule details ›
Chains: AC, AD
Length: 230 amino acids
Theoretical weight: 25.5 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A5F0PYH4 (Residues: 6-235; Coverage: 70%)
Gene names: ELT49_23095, rpoA
Sequence domains:
DNA-directed RNA polymerase subunit beta' Chain: AE
Molecule details ›
Chain: AE
Length: 1358 amino acids
Theoretical weight: 150.44 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A659GYB8 (Residues: 16-1373; Coverage: 97%)
Gene names: ELV15_17980, rpoC
Sequence domains:
DNA-directed RNA polymerase subunit omega Chain: AF
Molecule details ›
Chain: AF
Length: 83 amino acids
Theoretical weight: 9.36 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: T9C803 (Residues: 2-84; Coverage: 91%)
Gene names: G943_04108, rpoZ
Sequence domains: RNA polymerase Rpb6
30S ribosomal protein S18 Chain: C
Molecule details ›
Chain: C
Length: 66 amino acids
Theoretical weight: 7.73 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A222QU44 (Residues: 10-75; Coverage: 88%)
Gene names: A610_4975, rpsR
Sequence domains: Ribosomal protein S18
30S ribosomal protein S20 Chain: E
Molecule details ›
Chain: E
Length: 86 amino acids
Theoretical weight: 9.58 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7X3A7 (Residues: 2-87; Coverage: 99%)
Gene names: HMPREF9552_01086, rpsT
Sequence domains: Ribosomal protein S20
30S ribosomal protein S21 Chain: F
Molecule details ›
Chain: F
Length: 70 amino acids
Theoretical weight: 8.39 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: E9TH65 (Residues: 2-71; Coverage: 99%)
Gene names: HMPREF9542_03144, rpsU
Sequence domains: Ribosomal protein S21
30S ribosomal protein S2 Chain: G
Molecule details ›
Chain: G
Length: 225 amino acids
Theoretical weight: 25.07 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: C3TPN2 (Residues: 3-227; Coverage: 93%)
Gene names: A2F99_001367, A5U30_000304, A6583_16605, A6592_02990, A8499_001874, A8C65_17850, A8W81_000033, A8X14_001297, A8X68_000033, A9819_00790, AAG43_001513, AAG80_000434, AAG81_004372, AAS29_001208, ABT96_000033, ACW72_001741, ADS93_001964, AM340_01170, AM464_17645, AMK64_000524, AO169_000709, APX88_24825, AT335_002551, AT845_002206, AUQ29_01560, AW059_09840, AW086_02685, AW118_17855, AWP47_05585, AZZ83_003980, B2D52_000448, B5N24_001036, B6L15_001200, B6R12_000948, B6R15_000228, B6R17_000033, B6R27_000725, B6R48_000725, B6R87_000726, B7C15_000587, B9T59_07520, BANRA_02273, BANRA_03339, BE930_13685, BE963_14830, BER14_07785, BF271_001565, BF481_003689, BFL24_00935, BG821_001278, BH692_11605, BHS87_00800, BIQ87_00790, BIZ41_19080, BJI68_15640, BJJ90_21360, BK272_10840, BK373_09595, BK375_04645, BKD45_001086, BM922_001352, BMC34_001127, BMC79_000033, BMR21_15835, BMT49_02175, BMT91_01365, BO068_002859, BO178_001944, BOB65_001496, BON65_09430, BON66_02955, BON73_05315, BON83_24855, BON86_04410, BON87_26695, BON91_06960, BON92_02750, BON93_03940, BON96_17215, BON98_18185, BOY03_001163, BR158_000500, BR331_02985, BRV34_001356, BRV41_001378, BUE81_01710, BUE82_19980, BWI89_14055, BXT93_00705, BZL69_20205, BvCms2454_04107, BvCmsC61A_04364, BvCmsHHP019_00044, BvCmsHHP056_04094, BvCmsKKP005_03191, BvCmsKKP036_03788, BvCmsKSP076_03014, BvCmsSIP024_03994, C2121_002936, C2M16_10795, C2U48_09610, C3F40_12245, C4952_002845, C4M78_19960, C5715_17350, C5F72_21625, C5N07_08575, C5Y87_12570, C6B13_04325, C6L19_002514, C9E67_25210, C9Z43_09525, C9Z62_06970, C9Z68_04785, CA593_02870, CBT22_000307, CCV12_002000, CCV24_000720, CCZ91_001649, CD42_002697, CDC27_24690, CDL36_07905, CDL37_07245, CDL57_02235, CG692_09500, CG831_000820, CIG67_16575, CLG78_001128, CQP61_22090, CR539_04935, CS116_000033, CSE52_002183, CT143_22140, CX692_001437, CX693_001437, CX694_000987, CX699_001375, CXJ73_002503, CY655_00895, CYM75_004174, D0X26_09420, D1912_13690, D2183_03890, D3822_17335, D3G36_16675, D3O91_03185, D3Y67_16405, D4U49_05950, D6T60_04050, D9D31_08885, D9D43_02305, D9E34_01105, D9E49_02145, D9F92_13895, D9H13_16245, D9J03_00165, D9J11_16825, D9J61_11510, D9K17_15695, DAH23_11200, DAH34_04190, DAH37_16335, DAH50_07060, DD762_01090, DEN86_04070, DL654_15710, DLW88_03755, DLX40_11060, DM968_04645, DN627_10245, DNX30_02270, DP258_09355, DS966_12905, DTL43_05925, DTL90_09735, DTM10_02780, DTM45_12630, DU321_03650, DXB10_06645, DXT73_18920, E0N24_06870, E0P28_15450, E2112_01240, E2119_15580, E2123_15000, E2127_15010, E2128_01350, E2129_02860, E2135_11635, E3N34_09355, E4K51_05790, E4K54_08040, E5P52_06840, E5S61_20145, E5S62_13855, EA239_13420, EA435_20380, EBP16_09105, EC3234A_2c01500, ECs0171, ED648_00165, EI021_19845, EI041_03160, EIA08_06325, EIZ93_07925, EL79_3705, EL80_3652, ELT17_01250, ELT21_15045, ELT29_02915, ELT31_08695, ELT33_15870, ELT48_12180, ELT49_18475, ELT58_11815, ELT72_19820, ELU83_06360, ELU85_21270, ELU95_07270, ELV10_05885, ELV13_13145, ELV15_10275, ELV22_16455, ELV24_19200, ELV28_04185, ELX56_19475, ELX68_15965, ELX69_11255, ELX70_19405, ELX76_14550, ELX79_12490, ELX83_20605, ELX96_04945, ELY23_06765, ELY24_11290, ELY32_08455, ELY41_06540, ELY48_16915, ELY50_16140, EO241_11800, EPS76_09885, EQO00_21085, ERS085358_03257, ERS085366_02719, ERS085386_01543, ERS085406_00569, ERS085411_00031, ERS139208_01228, ETECE1373_03887, ETECE925_03850, EVY14_15615, EWK56_14885, EXX13_05315, EXX79_00170, EYX47_12820, EYY34_22885, Esc0902E_01690, ExPECSC038_03990, F2N27_19280, F2N28_19555, F2N31_00165, F3N40_16020, F7F11_02075, F9386_00170, F9400_15990, F9407_10155, F9571_18160, F9B07_03520, F9S76_22065, F9S83_02275, F9V07_07505, F9V22_04715, F9V24_09500, F9X20_009285, F9X20_09355, FA849_08720, FA868_06535, FDM60_08820, FE587_16370, FEJ01_15060, FEL34_01755, FFF58_06185, FGG80_07195, FGY90_12915, FHD44_14150, FHR00_00170, FJQ51_00170, FKO60_12340, FNJ67_21465, FOI11_012840, FOI11_22840, FPI65_00925, FPS82_06120, FQ021_14140, FQE77_12245, FQF29_01530, FV293_02895, FY127_02945, FZC17_23565, FZN26_20725, FZN30_04795, FZN31_19985, G3565_18165, G3813_000515, G4A38_19340, G5603_21760, G5696_01310, G6P89_20360, G6Z99_21820, G7635_002420, GAJ26_21380, GBE29_06535, GF147_13280, GF199_00160, GF646_01380, GF699_14270, GFY34_15725, GFY48_19085, GFZ60_03495, GGB84_001276, GIB53_10120, GJ11_00885, GKE84_09020, GKF52_14725, GKF86_01190, GKF89_14780, GKG12_02120, GKZ24_00170, GLW94_14810, GNO40_01330, GOP20_16745, GP662_15455, GP711_09530, GQA06_13075, GQE42_12800, GQE64_01395, GQE87_01035, GQM13_12620, GQR15_00165, GQW07_00970, GQW68_00170, GQW80_13515, GRC73_19590, GRO95_02765, GRQ19_00165, GRW05_07695, GRW57_10410, GRW80_16650, GRW81_09810, GSY44_00165, GTP88_05405, GUB08_19160, GUB92_12155, GUI33_00165, GW978_09660, GXU05_001402, GXV26_001258, H0O53_18585, H0O72_10185, H4P50_20635, H4P51_20485, H5C78_04195, HCF72_000033, HH411_000480, HH795_000802, HHG09_000093, HI055_000776, HIE29_003103, HIF90_000033, HIN64_000550, HIO80_003172, HIT56_004089, HJ940_000277, HJ942_003221, HJM92_002760, HJN04_003133, HJO75_000276, HJQ60_000692, HJS37_001627, HJS41_003083, HJU54_003402, HL425_05505, HL563_02735, HL601_07700, HLU10_19960, HLU56_21430, HLV18_20625, HLZ20_18045, HLZ50_06960, HMJ82_00170, HMT08_17585, HMU06_10055, HMU48_04755, HMV41_18170, HMV95_04585, HMW38_10575, HNC30_00170, HNC36_16160, HNC38_19270, HNC52_16430, HNC59_20345, HNC66_11685, HNC75_04075, HNC99_17425, HND12_10355, HND24_07510, HNO08_14310, HNV94_05400, HNY50_06345, HNY54_07080, HPE39_04360, HV109_19380, HVV39_17630, HVV53_21500, HVW04_10225, HVW22_02385, HVW43_11755, HVX16_21155, HVX31_16115, HVZ30_16745, HVZ71_20400, HX136_20600, HZ71_000497, HZ72_000283, HmCms169_00360, HmCms184_03911, HmCmsJML074_03001, I6H00_14085, I6H01_17695, IA00_000033, MJ49_06195, MS7163_00186, NCTC10082_01383, NCTC10089_04076, NCTC10090_02160, NCTC10767_03962, NCTC10974_04616, NCTC11126_03634, NCTC12950_04424, NCTC13127_05455, NCTC13148_05196, NCTC4450_07399, NCTC7922_05813, NCTC7927_04507, NCTC7928_04613, NCTC8008_03673, NCTC8450_01117, NCTC8500_04546, NCTC8621_04202, NCTC8959_04843, NCTC9044_03184, NCTC9045_04711, NCTC9048_04434, NCTC9050_02026, NCTC9117_05053, NCTC9434_02610, NCTC9702_04760, NCTC9706_01337, NCTC9775_02328, NCTC9777_00472, NCTC9969_04265, PGD_03810, SAMEA3472044_04157, SAMEA3472056_00973, SAMEA3472064_04388, SAMEA3472080_03752, SAMEA3472112_04653, SAMEA3472117_04738, SAMEA3472120_03165, SAMEA3472147_00380, SAMEA3484427_01375, SAMEA3484429_01106, SAMEA3751407_04814, SAMEA3752312_01943, SAMEA3752386_04702, SAMEA3752557_00874, SAMEA3753300_01863, SM09_00909, THOESC010_36700, TUM18780_36030, UN91_10580, WP2S18E08_37750, WP4S18E07_36950, WP4S18E08_36600, WQ89_09555, rpsB
Sequence domains: Ribosomal protein S2
30S ribosomal protein S1 Chain: H
Molecule details ›
Chain: H
Length: 346 amino acids
Theoretical weight: 38.49 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A7H4YPL5 (Residues: 3-348; Coverage: 71%)
Gene name: D9J61_23895
30S ribosomal protein S3 Chain: I
Molecule details ›
Chain: I
Length: 208 amino acids
Theoretical weight: 23.25 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A376HTV6 (Residues: 2-209; Coverage: 90%)
Gene names: NCTC9094_00425, rpsC
Sequence domains:
30S ribosomal protein S4 Chain: J
Molecule details ›
Chain: J
Length: 205 amino acids
Theoretical weight: 23.38 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: L3PZ69 (Residues: 2-206; Coverage: 100%)
Gene names: A1UM_03988, rpsD
Sequence domains:
30S ribosomal protein S5 Chain: K
Molecule details ›
Chain: K
Length: 156 amino acids
Theoretical weight: 16.48 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: F4TL26 (Residues: 10-165; Coverage: 93%)
Gene names: ECJG_02962, rpsE
Sequence domains:
30S ribosomal protein S6 Chain: L
Molecule details ›
Chain: L
Length: 104 amino acids
Theoretical weight: 12.13 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A376ZL25 (Residues: 1-104; Coverage: 78%)
Gene names: NCTC8179_00894, rpsF
Sequence domains: Ribosomal protein S6
30S ribosomal protein S7 Chain: M
Molecule details ›
Chain: M
Length: 151 amino acids
Theoretical weight: 16.86 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: S1D5F0 (Residues: 2-152; Coverage: 97%)
Gene names: A1U1_03545, rpsG
30S ribosomal protein S8 Chain: N
Molecule details ›
Chain: N
Length: 129 amino acids
Theoretical weight: 14.02 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D8A1L7 (Residues: 2-130; Coverage: 99%)
Gene names: HMPREF9530_00381, rpsH
Sequence domains: Ribosomal protein S8
30S ribosomal protein S9 Chain: O
Molecule details ›
Chain: O
Length: 127 amino acids
Theoretical weight: 14.55 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: T9TH92 (Residues: 4-130; Coverage: 98%)
Gene names: G994_03449, rpsI
Sequence domains: Ribosomal protein S9/S16
30S ribosomal protein S10 Chain: P
Molecule details ›
Chain: P
Length: 99 amino acids
Theoretical weight: 11.25 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A069XEJ0 (Residues: 5-103; Coverage: 96%)
Gene names: AD17_4430, rpsJ
Sequence domains: Ribosomal protein S10p/S20e
30S ribosomal protein S11 Chain: Q
Molecule details ›
Chain: Q
Length: 117 amino acids
Theoretical weight: 12.49 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P0A7R9 (Residues: 13-129; Coverage: 91%)
Gene names: JW3259, b3297, rpsK
Sequence domains: Ribosomal protein S11
30S ribosomal protein S12 Chain: R
Molecule details ›
Chain: R
Length: 123 amino acids
Theoretical weight: 13.68 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: I2UHF1 (Residues: 2-124; Coverage: 99%)
Gene names: EC40522_4581, rpsL
Sequence domains: Ribosomal protein S12/S23
30S ribosomal protein S14 Chain: S
Molecule details ›
Chain: S
Length: 100 amino acids
Theoretical weight: 11.48 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: I2X0X3 (Residues: 2-101; Coverage: 99%)
Gene names: EC40967_1809, rpsN
Sequence domains: Ribosomal protein S14p/S29e
30S ribosomal protein S15 Chain: T
Molecule details ›
Chain: T
Length: 88 amino acids
Theoretical weight: 10.16 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7XN21 (Residues: 2-89; Coverage: 99%)
Gene names: HMPREF9536_02433, rpsO
Sequence domains: Ribosomal protein S15
30S ribosomal protein S16 Chain: U
Molecule details ›
Chain: U
Length: 82 amino acids
Theoretical weight: 9.21 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: B7MIU7 (Residues: 1-82; Coverage: 100%)
Gene names: ECS88_2795, rpsP
Sequence domains: Ribosomal protein S16
30S ribosomal protein S17 Chain: V
Molecule details ›
Chain: V
Length: 80 amino acids
Theoretical weight: 9.26 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A080IK26 (Residues: 4-83; Coverage: 95%)
Gene names: AC28_3826, rpsQ
Sequence domains: Ribosomal protein S17
30S ribosomal protein S19 Chain: W
Molecule details ›
Chain: W
Length: 83 amino acids
Theoretical weight: 9.42 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: S1EA57 (Residues: 2-84; Coverage: 90%)
Gene names: A1UI_03589, rpsS
Sequence domains: Ribosomal protein S19
30S ribosomal protein S13 Chain: X
Molecule details ›
Chain: X
Length: 116 amino acids
Theoretical weight: 12.87 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A4P8BX31 (Residues: 2-117; Coverage: 98%)
Gene names: CCU01_002570, rpsM
Sequence domains: Ribosomal protein S13/S18
50S ribosomal protein L27 Chain: b
Molecule details ›
Chain: b
Length: 76 amino acids
Theoretical weight: 8.28 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A069XRX8 (Residues: 10-85; Coverage: 89%)
Gene names: AD17_0754, rpmA
50S ribosomal protein L28 Chain: c
Molecule details ›
Chain: c
Length: 77 amino acids
Theoretical weight: 8.9 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: J7RMJ2 (Residues: 2-78; Coverage: 99%)
Gene names: BN16_42691, rpmB
Sequence domains: Ribosomal L28 family
50S ribosomal protein L29 Chain: e
Molecule details ›
Chain: e
Length: 62 amino acids
Theoretical weight: 7.16 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A069XF36 (Residues: 2-63; Coverage: 98%)
Gene names: AD17_4439, rpmC
Sequence domains: Ribosomal L29 protein
50S ribosomal protein L30 Chain: f
Molecule details ›
Chain: f
Length: 58 amino acids
Theoretical weight: 6.42 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: I2X1N4 (Residues: 2-59; Coverage: 98%)
Gene names: EC40967_1814, rpmD
Sequence domains: Ribosomal protein L30p/L7e
50S ribosomal protein L31 Chain: g
Molecule details ›
Chain: g
Length: 66 amino acids
Theoretical weight: 7.52 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: V0YYV3 (Residues: 1-66; Coverage: 94%)
Gene names: HMPREF1611_02118, rpmE
Sequence domains: Ribosomal protein L31
50S ribosomal protein L2 Chain: h
Molecule details ›
Chain: h
Length: 271 amino acids
Theoretical weight: 29.66 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P60422 (Residues: 2-272; Coverage: 99%)
Gene names: JW3279, b3317, rplB
Sequence domains:
50S ribosomal protein L32 Chain: i
Molecule details ›
Chain: i
Length: 56 amino acids
Theoretical weight: 6.33 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: E3PJQ3 (Residues: 2-57; Coverage: 98%)
Gene names: ETEC_1154, rpmF
Sequence domains: Ribosomal L32p protein family
50S ribosomal protein L3 Chain: j
Molecule details ›
Chain: j
Length: 209 amino acids
Theoretical weight: 22.28 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P60438 (Residues: 1-209; Coverage: 100%)
Gene names: JW3282, b3320, rplC
Sequence domains: Ribosomal protein L3
50S ribosomal protein L33 Chain: k
Molecule details ›
Chain: k
Length: 52 amino acids
Theoretical weight: 6.06 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: L4IX08 (Residues: 4-55; Coverage: 95%)
Gene names: A311_04573, rpmG
Sequence domains: Ribosomal protein L33
50S ribosomal protein L4 Chain: l
Molecule details ›
Chain: l
Length: 201 amino acids
Theoretical weight: 22.12 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7Z9F6 (Residues: 1-201; Coverage: 100%)
Gene names: HMPREF9534_00849, rplD
Sequence domains: Ribosomal protein L4/L1 family
50S ribosomal protein L34 Chain: m
Molecule details ›
Chain: m
Length: 46 amino acids
Theoretical weight: 5.4 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: B7MGC4 (Residues: 1-46; Coverage: 100%)
Gene names: ECS88_4126, rpmH
Sequence domains: Ribosomal protein L34
50S ribosomal protein L5 Chain: n
Molecule details ›
Chain: n
Length: 177 amino acids
Theoretical weight: 20.07 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: S1EUW9 (Residues: 2-178; Coverage: 99%)
Gene names: A1UI_03581, rplE
Sequence domains:
50S ribosomal protein L35 Chain: o
Molecule details ›
Chain: o
Length: 64 amino acids
Theoretical weight: 7.18 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: G0F552 (Residues: 2-65; Coverage: 99%)
Gene names: UMNF18_2164, rpmI
Sequence domains: Ribosomal protein L35
50S ribosomal protein L6 Chain: p
Molecule details ›
Chain: p
Length: 175 amino acids
Theoretical weight: 18.67 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A5B7PA13 (Residues: 2-176; Coverage: 99%)
Gene names: B9S25_002210, rplF
Sequence domains: Ribosomal protein L6
50S ribosomal protein L36 Chain: q
Molecule details ›
Chain: q
Length: 38 amino acids
Theoretical weight: 4.38 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0E2L017 (Residues: 1-38; Coverage: 100%)
Gene names: G925_03522, rpmJ
Sequence domains: Ribosomal protein L36
50S ribosomal protein L9 Chain: r
Molecule details ›
Chain: r
Length: 149 amino acids
Theoretical weight: 15.79 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7ZI15 (Residues: 1-149; Coverage: 100%)
Gene names: HMPREF9534_03905, rplI
Sequence domains:
50S ribosomal protein L13 Chain: s
Molecule details ›
Chain: s
Length: 142 amino acids
Theoretical weight: 16.05 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7ZET0 (Residues: 1-142; Coverage: 100%)
Gene names: HMPREF9534_02760, rplM
Sequence domains: Ribosomal protein L13
50S ribosomal protein L14 Chain: t
Molecule details ›
Chain: t
Length: 123 amino acids
Theoretical weight: 13.57 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: D7Z9G5 (Residues: 1-123; Coverage: 100%)
Gene names: HMPREF9534_00858, rplN
Sequence domains: Ribosomal protein L14p/L23e
50S ribosomal protein L15 Chain: u
Molecule details ›
Chain: u
Length: 144 amino acids
Theoretical weight: 15.01 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A037Y8L6 (Residues: 1-144; Coverage: 100%)
Gene names: A8C65_19395, A8W81_004032, ACU57_21045, AM464_09135, AUQ29_24965, BANRA_01932, BANRA_03684, BHS87_18545, BJI68_08760, BJJ90_02210, BO068_004002, BON73_23950, BON93_00865, BON98_13310, BUE81_25610, BvCms2454_01416, BvCmsHHP019_04131, BvCmsHHP056_02703, C5F72_02595, C5N07_23575, C5Y87_24260, CA593_09735, CG692_20270, CIG67_10760, D0X26_24495, D3O91_20305, D3Y67_24390, D9H13_20575, DAH37_14685, DAH50_22920, DM968_21045, DTL43_21000, E2119_19640, E2135_06185, E4K51_21490, E4K54_21625, EC1094V2_354, EC3234A_55c00230, EI021_21030, EI041_20035, EIZ93_12470, EL79_0415, EL80_0407, ETECE925_00488, F2N31_23635, F9V24_19145, FOI11_019260, FOI11_03920, FV293_22465, FWK02_06270, G4A38_21510, G5632_17770, GF646_20370, GF699_19735, GIB53_19400, GKF86_20070, GKF89_18470, GP954_00945, GP979_02005, GQE64_20420, GRW05_09060, GRW57_03540, GRW80_20585, GRW81_21150, H4P50_02035, H4P51_02025, HHG09_001963, HMS79_16265, HMV95_19605, HNC36_20190, HNC52_20970, HPE39_23335, HVV53_13950, HVY77_02175, HVZ33_02065, HX136_02195, NCTC11022_03475, NCTC11126_02772, NCTC13216_01351, NCTC8008_05345, NCTC9045_00567, NCTC9048_00519, NCTC9117_00757, NCTC9706_02738, PGD_00585, SAMEA3472064_04732, SAMEA3472080_04748, SAMEA3484427_04887, SAMEA3484429_04875, SAMEA3751407_00023, SAMEA3752386_02424, SAMEA3753300_02227, WP2S18E08_04080, rplO
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
50S ribosomal protein L16 Chain: v
Molecule details ›
Chain: v
Length: 136 amino acids
Theoretical weight: 15.31 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P0ADY7 (Residues: 1-136; Coverage: 100%)
Gene names: JW3275, b3313, rplP
Sequence domains: Ribosomal protein L16p/L10e
50S ribosomal protein L17 Chain: w
Molecule details ›
Chain: w
Length: 119 amino acids
Theoretical weight: 13.59 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A2T1LEK9 (Residues: 1-119; Coverage: 94%)
Gene names: C6985_20075, DXB10_21745, E3N34_07125, NCTC10767_01524, NCTC9081_00927, rplQ
Sequence domains: Ribosomal protein L17
50S ribosomal protein L18 Chain: x
Molecule details ›
Chain: x
Length: 116 amino acids
Theoretical weight: 12.66 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: F4TL27 (Residues: 2-117; Coverage: 99%)
Gene names: ECJG_02963, rplR
50S ribosomal protein L19 Chain: y
Molecule details ›
Chain: y
Length: 114 amino acids
Theoretical weight: 13.03 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A4P8C2I6 (Residues: 2-115; Coverage: 99%)
Gene names: CCU01_006970, rplS
Sequence domains: Ribosomal protein L19
50S ribosomal protein L20 Chain: z
Molecule details ›
Chain: z
Length: 117 amino acids
Theoretical weight: 13.4 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: L3CCT0 (Residues: 2-118; Coverage: 99%)
Gene names: A13W_00675, rplT
Sequence domains: Ribosomal protein L20
NT DNA Chain: 5
Molecule details ›
Chain: 5
Length: 50 nucleotides
Theoretical weight: 12.36 KDa
T DNA Chain: 6
Molecule details ›
Chain: 6
Length: 27 nucleotides
Theoretical weight: 8.16 KDa
mRNA with 27 nt long spacer Chain: 7
Molecule details ›
Chain: 7
Length: 16 nucleotides
Theoretical weight: 5.2 KDa
E-site tRNA (fMet) Chains: A, B
Molecule details ›
Chains: A, B
Length: 76 nucleotides
Theoretical weight: 24.5 KDa
Sequence domains: tRNA
16S ribosomal RNA Chain: D
Molecule details ›
Chain: D
Length: 1534 nucleotides
Theoretical weight: 497.24 KDa
Sequence domains: Bacterial small subunit ribosomal RNA
mRNA in the ribosomal RNA entrance pore Chain: Y
Molecule details ›
Chain: Y
Length: 3 nucleotides
Theoretical weight: 874 Da
23S ribosomal RNA Chain: a
Molecule details ›
Chain: a
Length: 2903 nucleotides
Theoretical weight: 941.27 KDa
Sequence domains: Bacterial large subunit ribosomal RNA
5S ribosomal RNA Chain: d
Molecule details ›
Chain: d
Length: 120 nucleotides
Theoretical weight: 38.79 KDa
Sequence domains: 5S ribosomal RNA

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 8.9Å
Relevant EMDB volumes: EMD-21483
Expression system: Escherichia coli