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Crystal Structure of Stabilized GP from Makona Variant of Ebola Virus

X-ray diffraction
3.5Å resolution
PDB entry 6vkm coloured by chain, front view.
PDB entry 6vkm coloured by chain, side view.
PDB entry 6vkm coloured by chain, top view.
Source organism: Zaire ebolavirus
Assembly composition:
homo trimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: GP2
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Multimeric state: homo trimer
Accessible surface area: 46284.97 Å2
Buried surface area: 15023.28 Å2
Dissociation area: 5,980.21 Å2
Dissociation energy (ΔGdiss): 65.44 kcal/mol
Dissociation entropy (TΔSdiss): 29.74 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-170176

Macromolecules

Envelope glycoprotein
Chain: A
Length: 494 amino acids
Theoretical weight: 55.45 KDa
Source organism: Zaire ebolavirus
Expression system: Homo sapiens
UniProt:
  • Canonical: Q05320 (Residues: 1-647; Coverage: 71%)
Gene name: GP
Pfam: Filovirus glycoprotein
InterPro:
Envelope glycoprotein in PDB entry 6vkm, assembly 1, front view.
Envelope glycoprotein in PDB entry 6vkm, assembly 1, side view.
Envelope glycoprotein in PDB entry 6vkm, assembly 1, top view.
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