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GluA2 in complex with its auxiliary subunit CNIH3 in AS map II - (LBD-TMD-C3(AS) II)- with antagonist ZK200775, without NTD

Source organisms:
Biochemical function: channel regulator activity
Biological process: regulation of AMPA receptor activity
Cellular component: membrane

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF03311
Domain description: Cornichon protein
Occurring in:
  1. Protein cornichon homolog 3
The deposited structure of PDB entry 6ud4 contains 8 copies of Pfam domain PF03311 (Cornichon protein) in Protein cornichon homolog 3. Showing 2 copies in chain D [auth F].

PF00497
Domain description: Bacterial extracellular solute-binding proteins, family 3
Occurring in:
  1. Glutamate receptor 2

PF00060
Domain description: Ligand-gated ion channel
Occurring in:
  1. Glutamate receptor 2
The deposited structure of PDB entry 6ud4 contains 4 copies of Pfam domain PF00060 (Ligand-gated ion channel) in Glutamate receptor 2. Showing 1 copy in chain A.

PF10613
Domain description: Ligated ion channel L-glutamate- and glycine-binding site
Occurring in:
  1. Glutamate receptor 2
The deposited structure of PDB entry 6ud4 contains 4 copies of Pfam domain PF10613 (Ligated ion channel L-glutamate- and glycine-binding site) in Glutamate receptor 2. Showing 1 copy in chain A.

PF01094
Domain description: Receptor family ligand binding region
Occurring in:
  1. Glutamate receptor 2
The deposited structure of PDB entry 6ud4 contains 4 copies of Pfam domain PF01094 (Receptor family ligand binding region) in Glutamate receptor 2. Showing 1 copy in chain A (this domain is out of the observed residue ranges!).

InterPro InterPro annotations
IPR003377
Domain description: Cornichon
Occurring in:
  1. Protein cornichon homolog 3
IPR001508
Domain description: Ionotropic glutamate receptor, metazoa
Occurring in:
  1. Glutamate receptor 2
IPR001320
Domain description: Ionotropic glutamate receptor, C-terminal
Occurring in:
  1. Glutamate receptor 2
IPR019594
Domain description: Ionotropic glutamate receptor, L-glutamate and glycine-binding domain
Occurring in:
  1. Glutamate receptor 2
IPR033466
Domain description: Cornichon, conserved site
Occurring in:
  1. Protein cornichon homolog 3
IPR015683
Domain description: Ionotropic glutamate receptor
Occurring in:
  1. Glutamate receptor 2
IPR001828
Domain description: Receptor, ligand binding region
Occurring in:
  1. Glutamate receptor 2
IPR028082
Domain description: Periplasmic binding protein-like I
Occurring in:
  1. Glutamate receptor 2

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