› 6rvr

Electron Microscopy
3.46Å resolution

Atomic structure of the Epstein-Barr portal, structure I

Released:
DOI: 10.2210/pdb6rvr/pdb
PDB entry 6rvr coloured by chain, front view.
PDB entry 6rvr coloured by chain, side view.
PDB entry 6rvr coloured by chain, top view.
Source organism: Human gammaherpesvirus 4
Primary publication:
Atomic structure of the Epstein-Barr virus portal.
Machón C, Fàbrega-Ferrer M, Zhou D, Cuervo A, Carrascosa JL, Stuart DI, Coll M
Nat Commun 10 3891 (2019)
PMID: 31467275
Related structures: EMD-10010

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo dodecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-174719 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Portal protein Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 613 amino acids
Theoretical weight: 68.54 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q3KSR9 (Residues: 1-613; Coverage: 100%)
Gene name: BBRF1
Sequence domains: Herpesvirus UL6 like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.46Å
Relevant EMDB volumes: EMD-10010
Expression system: Spodoptera frugiperda

Quick links

Citations

6 review citations

Immunosuppressive Tumor Microenvironment and Immunotherapy of Epstein-Barr Virus-Associated Malignancies.
Zheng et al. (2022)
5 more

1 mention without citation

Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Liu et al. (2020)