6oab

Electron Microscopy
3.6Å resolution

Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 2

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Cell division control protein 48 Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 835 amino acids
Theoretical weight: 92.11 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P25694 (Residues: 1-835; Coverage: 100%)
Gene names: CDC48, YDL126C
Sequence domains:
poly(alanine) substrate Chain: H
Molecule details ›
Chain: H
Length: 24 amino acids
Theoretical weight: 1.72 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli

Ligands and Environments

2 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.6Å
Relevant EMDB volumes: EMD-20000
Expression system: Escherichia coli