Articles - 6nmp mentioned but not cited (3)
- Snapshot of an oxygen intermediate in the catalytic reaction of cytochrome c oxidase. Ishigami I, Lewis-Ballester A, Echelmeier A, Brehm G, Zatsepin NA, Grant TD, Coe JD, Lisova S, Nelson G, Zhang S, Dobson ZF, Boutet S, Sierra RG, Batyuk A, Fromme P, Fromme R, Spence JCH, Ros A, Yeh SR, Rousseau DL. Proc Natl Acad Sci U S A 116 3572-3577 (2019)
- Temperature-dependent structural transition following X-ray-induced metal center reduction in oxidized cytochrome c oxidase. Ishigami I, Russi S, Cohen A, Yeh SR, Rousseau DL. J Biol Chem 298 101799 (2022)
- Structural Diversity in 2,2'-[Naphthalene-1,8:4,5-bis(dicarboximide)-N,N'-diyl]-bis(ethylammonium) Iodoplumbates. Tremblay MH, Zeidell AM, Rigin S, Tyznik C, Bacsa J, Zhang Y, Al Kurdi K, Jurchescu OD, Timofeeva TV, Barlow S, Marder SR. Inorg Chem 59 8070-8080 (2020)
Reviews citing this publication (7)
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- Targeting Mitochondrial Singlet Oxygen Dynamics Offers New Perspectives for Effective Metabolic Therapies of Cancer. da Veiga Moreira J, Schwartz L, Jolicoeur M. Front Oncol 10 573399 (2020)
- Mapping Enzyme Landscapes by Time-Resolved Crystallography with Synchrotron and X-Ray Free Electron Laser Light. Wilson MA. Annu Rev Biophys 51 79-98 (2022)
- New Horizons in Structural Biology of Membrane Proteins: Experimental Evaluation of the Role of Conformational Dynamics and Intrinsic Flexibility. Puthenveetil R, Christenson ET, Vinogradova O. Membranes (Basel) 12 227 (2022)
- Heme-copper and Heme O2-derived synthetic (bioinorganic) chemistry toward an understanding of cytochrome c oxidase dioxygen chemistry. Panda S, Phan H, Karlin KD. J Inorg Biochem 249 112367 (2023)
- Recent progress in experimental studies on the catalytic mechanism of cytochrome c oxidase. Shimada A, Tsukihara T, Yoshikawa S. Front Chem 11 1108190 (2023)
- Structural Characterization of Multienzyme Assemblies: An Overview. Papageorgiou AC. Methods Mol Biol 2487 51-72 (2022)
Articles citing this publication (26)
- MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography. Clabbers MTB, Holmes S, Muusse TW, Vajjhala PR, Thygesen SJ, Malde AK, Hunter DJB, Croll TI, Flueckiger L, Nanson JD, Rahaman MH, Aquila A, Hunter MS, Liang M, Yoon CH, Zhao J, Zatsepin NA, Abbey B, Sierecki E, Gambin Y, Stacey KJ, Darmanin C, Kobe B, Xu H, Ve T. Nat Commun 12 2578 (2021)
- 3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow. Monteiro DCF, von Stetten D, Stohrer C, Sans M, Pearson AR, Santoni G, van der Linden P, Trebbin M. IUCrJ 7 207-219 (2020)
- Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography. Pandey S, Calvey G, Katz AM, Malla TN, Koua FHM, Martin-Garcia JM, Poudyal I, Yang JH, Vakili M, Yefanov O, Zielinski KA, Bajt S, Awel S, Doerner K, Frank M, Gelisio L, Jernigan R, Kirkwood H, Kloos M, Koliyadu J, Mariani V, Miller MD, Mills G, Nelson G, Olmos JL, Sadri A, Sato T, Tolstikova A, Xu W, Ourmazd A, Spence JCH, Schwander P, Barty A, Chapman HN, Fromme P, Mancuso AP, Phillips GN, Bean R, Pollack L, Schmidt M. IUCrJ 8 878-895 (2021)
- A common coupling mechanism for A-type heme-copper oxidases from bacteria to mitochondria. Maréchal A, Xu JY, Genko N, Hartley AM, Haraux F, Meunier B, Rich PR. Proc Natl Acad Sci U S A 117 9349-9355 (2020)
- Cryo-EM structures of intermediates suggest an alternative catalytic reaction cycle for cytochrome c oxidase. Kolbe F, Safarian S, Piórek Ż, Welsch S, Müller H, Michel H. Nat Commun 12 6903 (2021)
- Segmented flow generator for serial crystallography at the European X-ray free electron laser. Echelmeier A, Cruz Villarreal J, Messerschmidt M, Kim D, Coe JD, Thifault D, Botha S, Egatz-Gomez A, Gandhi S, Brehm G, Conrad CE, Hansen DT, Madsen C, Bajt S, Meza-Aguilar JD, Oberthür D, Wiedorn MO, Fleckenstein H, Mendez D, Knoška J, Martin-Garcia JM, Hu H, Lisova S, Allahgholi A, Gevorkov Y, Ayyer K, Aplin S, Ginn HM, Graafsma H, Morgan AJ, Greiffenberg D, Klujev A, Laurus T, Poehlsen J, Trunk U, Mezza D, Schmidt B, Kuhn M, Fromme R, Sztuk-Dambietz J, Raab N, Hauf S, Silenzi A, Michelat T, Xu C, Danilevski C, Parenti A, Mekinda L, Weinhausen B, Mills G, Vagovic P, Kim Y, Kirkwood H, Bean R, Bielecki J, Stern S, Giewekemeyer K, Round AR, Schulz J, Dörner K, Grant TD, Mariani V, Barty A, Mancuso AP, Weierstall U, Spence JCH, Chapman HN, Zatsepin N, Fromme P, Kirian RA, Ros A. Nat Commun 11 4511 (2020)
- X-ray structures of catalytic intermediates of cytochrome c oxidase provide insights into its O2 activation and unidirectional proton-pump mechanisms. Shimada A, Etoh Y, Kitoh-Fujisawa R, Sasaki A, Shinzawa-Itoh K, Hiromoto T, Yamashita E, Muramoto K, Tsukihara T, Yoshikawa S. J Biol Chem 295 5818-5833 (2020)
- The XBI BioLab for life science experiments at the European XFEL. Han H, Round E, Schubert R, Gül Y, Makroczyová J, Meza D, Heuser P, Aepfelbacher M, Barák I, Betzel C, Fromme P, Kursula I, Nissen P, Tereschenko E, Schulz J, Uetrecht C, Ulicný J, Wilmanns M, Hajdu J, Lamzin VS, Lorenzen K. J Appl Crystallogr 54 7-21 (2021)
- Co-flow injection for serial crystallography at X-ray free-electron lasers. Doppler D, Rabbani MT, Letrun R, Cruz Villarreal J, Kim DH, Gandhi S, Egatz-Gomez A, Sonker M, Chen J, Koua FHM, Yang J, Youssef M, Mazalova V, Bajt S, Shelby ML, Coleman MA, Wiedorn MO, Knoska J, Schön S, Sato T, Hunter MS, Hosseinizadeh A, Kuptiz C, Nazari R, Alvarez RC, Karpos K, Zaare S, Dobson Z, Discianno E, Zhang S, Zook JD, Bielecki J, de Wijn R, Round AR, Vagovic P, Kloos M, Vakili M, Ketawala GK, Stander NE, Olson TL, Morin K, Mondal J, Nguyen J, Meza-Aguilar JD, Kodis G, Vaiana S, Martin-Garcia JM, Mariani V, Schwander P, Schmidt M, Messerschmidt M, Ourmazd A, Zatsepin N, Weierstall U, Bruce BD, Mancuso AP, Grant T, Barty A, Chapman HN, Frank M, Fromme R, Spence JCH, Botha S, Fromme P, Kirian RA, Ros A. J Appl Crystallogr 55 1-13 (2022)
- Critical roles of the CuB site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates. Shimada A, Hara F, Shinzawa-Itoh K, Kanehisa N, Yamashita E, Muramoto K, Tsukihara T, Yoshikawa S. J Biol Chem 297 100967 (2021)
- Coupled transport of electrons and protons in a bacterial cytochrome c oxidase-DFT calculated properties compared to structures and spectroscopies. Noodleman L, Han Du WG, McRee D, Chen Y, Goh T, Götz AW. Phys Chem Chem Phys 22 26652-26668 (2020)
- Geometric and Electronic Structure Contributions to O-O Cleavage and the Resultant Intermediate Generated in Heme-Copper Oxidases. Schaefer AW, Roveda AC, Jose A, Solomon EI. J Am Chem Soc 141 10068-10081 (2019)
- The three-spin intermediate at the O-O cleavage and proton-pumping junction in heme-Cu oxidases. Jose A, Schaefer AW, Roveda AC, Transue WJ, Choi SK, Ding Z, Gennis RB, Solomon EI. Science 373 1225-1229 (2021)
- Serial femtosecond crystallography. Barends TRM, Stauch B, Cherezov V, Schlichting I. Nat Rev Methods Primers 2 59 (2022)
- Electric fields control water-gated proton transfer in cytochrome c oxidase. Saura P, Riepl D, Frey DM, Wikström M, Kaila VRI. Proc Natl Acad Sci U S A 119 e2207761119 (2022)
- Biochemical and crystallographic studies of monomeric and dimeric bovine cytochrome c oxidase. Shinzawa-Itoh K, Muramoto K. Biophys Physicobiol 18 186-195 (2021)
- Radical in the Peroxide-Produced F-Type Ferryl Form of Bovine Cytochrome c Oxidase. Sztachova T, Tomkova A, Cizmar E, Jancura D, Fabian M. Int J Mol Sci 23 12580 (2022)
- Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser. Jernigan RJ, Logeswaran D, Doppler D, Nagaratnam N, Sonker M, Yang JH, Ketawala G, Martin-Garcia JM, Shelby ML, Grant TD, Mariani V, Tolstikova A, Sheikh MZ, Yung MC, Coleman MA, Zaare S, Kaschner EK, Rabbani MT, Nazari R, Zacks MA, Hayes B, Sierra RG, Hunter MS, Lisova S, Batyuk A, Kupitz C, Boutet S, Hansen DT, Kirian RA, Schmidt M, Fromme R, Frank M, Ros A, Chen JJ, Botha S, Fromme P. Structure 31 138-151.e5 (2023)
- Understanding Cysteine Chemistry Using Conventional and Serial X-Ray Protein Crystallography. Smith N, Wilson MA. Crystals (Basel) 12 1671 (2022)
- Biological function investigated by time-resolved structure determination. Schmidt M. Struct Dyn 10 010901 (2023)
- Going around the Kok cycle of the water oxidation reaction with femtosecond X-ray crystallography. Bhowmick A, Simon PS, Bogacz I, Hussein R, Zhang M, Makita H, Ibrahim M, Chatterjee R, Doyle MD, Cheah MH, Chernev P, Fuller FD, Fransson T, Alonso-Mori R, Brewster AS, Sauter NK, Bergmann U, Dobbek H, Zouni A, Messinger J, Kern J, Yachandra VK, Yano J. IUCrJ 10 642-655 (2023)
- Heterogeneity in M. tuberculosis β-lactamase inhibition by Sulbactam. Malla TN, Zielinski K, Aldama L, Bajt S, Feliz D, Hayes B, Hunter M, Kupitz C, Lisova S, Knoska J, Martin-Garcia JM, Mariani V, Pandey S, Poudyal I, Sierra RG, Tolstikova A, Yefanov O, Yoon CH, Ourmazd A, Fromme P, Schwander P, Barty A, Chapman HN, Stojkovic EA, Batyuk A, Boutet S, Phillips GN, Pollack L, Schmidt M. Nat Commun 14 5507 (2023)
- Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs. Carrillo M, Mason TJ, Karpik A, Martiel I, Kepa MW, McAuley KE, Beale JH, Padeste C. IUCrJ 10 678-693 (2023)
- Modeling difference x-ray scattering observations from an integral membrane protein within a detergent micelle. Sarabi D, Ostojić L, Bosman R, Vallejos A, Linse JB, Wulff M, Levantino M, Neutze R. Struct Dyn 9 054102 (2022)
- Structural insights into functional properties of the oxidized form of cytochrome c oxidase. Ishigami I, Sierra RG, Su Z, Peck A, Wang C, Poitevin F, Lisova S, Hayes B, Moss FR, Boutet S, Sublett RE, Yoon CH, Yeh SR, Rousseau DL. Nat Commun 14 5752 (2023)
- Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase. Safari C, Ghosh S, Andersson R, Johannesson J, Båth P, Uwangue O, Dahl P, Zoric D, Sandelin E, Vallejos A, Nango E, Tanaka R, Bosman R, Börjesson P, Dunevall E, Hammarin G, Ortolani G, Panman M, Tanaka T, Yamashita A, Arima T, Sugahara M, Suzuki M, Masuda T, Takeda H, Yamagiwa R, Oda K, Fukuda M, Tosha T, Naitow H, Owada S, Tono K, Nureki O, Iwata S, Neutze R, Brändén G. Sci Adv 9 eadh4179 (2023)