› 6niz

X-ray diffraction
0.93Å resolution

Atomic structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold

Released:
DOI: 10.2210/pdb6niz/pdb
PDB 6niz coloured by chain and viewed from the front.
PDB 6niz coloured by chain and viewed from the side.
PDB 6niz coloured by chain and viewed from the top.
Source organism: synthetic construct
Entry authors: Lieberman RL, Huard DJE

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*AP*AP*CP*CP*CP*CP)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 6 nucleotides
Theoretical weight: 1.74 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand AG 12 x AG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P41212
Unit cell:
a: 33.29Å b: 33.29Å c: 62.01Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.083 0.082 0.091
Expression system: Not provided

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Citations

2 review citations

The spatial organization of trace silver atoms on a DNA template.
Ma et al. (2020)
1 more