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Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Source organism: Homo sapiens
Biochemical function: RNA binding
Biological process: translation
Cellular component: cytoplasm

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00467
Domain description: KOW motif
Occurring in:
  1. Large ribosomal subunit protein uL24
  2. Large ribosomal subunit protein eL27
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein uL24. Showing 1 copy in chain NA [auth h].
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein eL27. Showing 1 copy in chain OA [auth i].

PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6
The deposited structure of PDB entry 6lu8 contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6. Showing 2 copies in chain R [auth I].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Large ribosomal subunit protein eL30. Showing 1 copy in chain N [auth E].
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Large ribosomal subunit protein eL8. Showing 1 copy in chain P [auth G].

PF10169
Domain description: Learning-associated protein
Occurring in:
  1. Protein LLP homolog
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF10169 (Learning-associated protein) in Protein LLP homolog. Showing 1 copy in chain XA [auth z].

PF14204
Domain description: Ribosomal L18 C-terminal region
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF14204 (Ribosomal L18 C-terminal region) in Large ribosomal subunit protein uL18. Showing 1 copy in chain WA [auth r].

PF17144
Domain description: Ribosomal large subunit proteins 60S L5, and 50S L18
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF17144 (Ribosomal large subunit proteins 60S L5, and 50S L18) in Large ribosomal subunit protein uL18. Showing 1 copy in chain WA [auth r].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Large ribosomal subunit protein uL30. Showing 1 copy in chain VA [auth p].

PF08079
Domain description: Ribosomal L30 N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF08079 (Ribosomal L30 N-terminal domain) in Large ribosomal subunit protein uL30. Showing 1 copy in chain VA [auth p].

PF01159
Domain description: Ribosomal protein L6e
Occurring in:
  1. Large ribosomal subunit protein eL6
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01159 (Ribosomal protein L6e) in Large ribosomal subunit protein eL6. Showing 1 copy in chain UA [auth o].

PF03868
Domain description: Ribosomal protein L6, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein eL6
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF03868 (Ribosomal protein L6, N-terminal domain) in Large ribosomal subunit protein eL6. Showing 1 copy in chain UA [auth o].

PF01247
Domain description: Ribosomal protein L35Ae
Occurring in:
  1. Large ribosomal subunit protein eL33
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01247 (Ribosomal protein L35Ae) in Large ribosomal subunit protein eL33. Showing 1 copy in chain TA [auth n].

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain SA [auth m].

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain SA [auth m].

PF01778
Domain description: Ribosomal L28e protein family
Occurring in:
  1. Large ribosomal subunit protein eL28
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01778 (Ribosomal L28e protein family) in Large ribosomal subunit protein eL28. Showing 1 copy in chain RA [auth l].

PF01655
Domain description: Ribosomal protein L32
Occurring in:
  1. Large ribosomal subunit protein eL32
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01655 (Ribosomal protein L32) in Large ribosomal subunit protein eL32. Showing 1 copy in chain QA [auth k].

PF01198
Domain description: Ribosomal protein L31e
Occurring in:
  1. Large ribosomal subunit protein eL31
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01198 (Ribosomal protein L31e) in Large ribosomal subunit protein eL31. Showing 1 copy in chain PA [auth j].

PF01777
Domain description: Ribosomal L27e protein family
Occurring in:
  1. Large ribosomal subunit protein eL27
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01777 (Ribosomal L27e protein family) in Large ribosomal subunit protein eL27. Showing 1 copy in chain OA [auth i].

PF16906
Domain description: Ribosomal proteins L26 eukaryotic, L24P archaeal
Occurring in:
  1. Large ribosomal subunit protein uL24
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF16906 (Ribosomal proteins L26 eukaryotic, L24P archaeal) in Large ribosomal subunit protein uL24. Showing 1 copy in chain NA [auth h].

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23. Showing 1 copy in chain MA [auth g].

PF03939
Domain description: Ribosomal protein L23, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF03939 (Ribosomal protein L23, N-terminal domain) in Large ribosomal subunit protein uL23. Showing 1 copy in chain MA [auth g].

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Large ribosomal subunit protein uL14. Showing 1 copy in chain LA [auth e].

PF01776
Domain description: Ribosomal L22e protein family
Occurring in:
  1. Large ribosomal subunit protein eL22
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01776 (Ribosomal L22e protein family) in Large ribosomal subunit protein eL22. Showing 1 copy in chain KA [auth d].

PF01157
Domain description: Ribosomal protein L21e
Occurring in:
  1. Large ribosomal subunit protein eL21
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01157 (Ribosomal protein L21e) in Large ribosomal subunit protein eL21. Showing 1 copy in chain JA [auth c].

PF01775
Domain description: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Occurring in:
  1. Large ribosomal subunit protein eL20
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01775 (Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A) in Large ribosomal subunit protein eL20. Showing 1 copy in chain IA [auth b].

PF01280
Domain description: Ribosomal protein L19e
Occurring in:
  1. Large ribosomal subunit protein eL19
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01280 (Ribosomal protein L19e) in Large ribosomal subunit protein eL19. Showing 1 copy in chain HA [auth a].

PF17135
Domain description: Ribosomal protein 60S L18 and 50S L18e
Occurring in:
  1. Large ribosomal subunit protein eL18
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF17135 (Ribosomal protein 60S L18 and 50S L18e) in Large ribosomal subunit protein eL18. Showing 1 copy in chain GA [auth Z].

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Large ribosomal subunit protein uL22
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Large ribosomal subunit protein uL22. Showing 1 copy in chain FA [auth Y].

PF01780
Domain description: Ribosomal L37ae protein family
Occurring in:
  1. Large ribosomal subunit protein eL43
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01780 (Ribosomal L37ae protein family) in Large ribosomal subunit protein eL43. Showing 1 copy in chain EA [auth X].

PF00935
Domain description: Ribosomal protein L44
Occurring in:
  1. Large ribosomal subunit protein eL42
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00935 (Ribosomal protein L44) in Large ribosomal subunit protein eL42. Showing 1 copy in chain DA [auth W].

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Large ribosomal subunit protein uL13
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Large ribosomal subunit protein uL13. Showing 1 copy in chain CA [auth V].

PF00827
Domain description: Ribosomal L15
Occurring in:
  1. Large ribosomal subunit protein eL15
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00827 (Ribosomal L15) in Large ribosomal subunit protein eL15. Showing 1 copy in chain BA [auth U].

PF01929
Domain description: Ribosomal protein L14
Occurring in:
  1. Large ribosomal subunit protein eL14
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01929 (Ribosomal protein L14) in Large ribosomal subunit protein eL14. Showing 1 copy in chain AA [auth S].

PF11176
Domain description: Translation machinery-associated protein 16
Occurring in:
  1. Translation machinery-associated protein 16
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF11176 (Translation machinery-associated protein 16) in Translation machinery-associated protein 16. Showing 1 copy in chain Z [auth R].

PF01294
Domain description: Ribosomal protein L13e
Occurring in:
  1. Large ribosomal subunit protein eL13
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01294 (Ribosomal protein L13e) in Large ribosomal subunit protein eL13. Showing 1 copy in chain Y [auth Q].

PF00832
Domain description: Ribosomal L39 protein
Occurring in:
  1. Large ribosomal subunit protein eL39
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00832 (Ribosomal L39 protein) in Large ribosomal subunit protein eL39. Showing 1 copy in chain X [auth P].

PF01781
Domain description: Ribosomal L38e protein family
Occurring in:
  1. Large ribosomal subunit protein eL38
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01781 (Ribosomal L38e protein family) in Large ribosomal subunit protein eL38. Showing 1 copy in chain W [auth O].

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in Large ribosomal subunit protein uL5. Showing 1 copy in chain V [auth N].

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in Large ribosomal subunit protein uL5. Showing 1 copy in chain V [auth N].

PF01907
Domain description: Ribosomal protein L37e
Occurring in:
  1. Large ribosomal subunit protein eL37
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01907 (Ribosomal protein L37e) in Large ribosomal subunit protein eL37. Showing 1 copy in chain U [auth M].

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15. Showing 1 copy in chain T [auth L].

PF01158
Domain description: Ribosomal protein L36e
Occurring in:
  1. Large ribosomal subunit protein eL36
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01158 (Ribosomal protein L36e) in Large ribosomal subunit protein eL36. Showing 1 copy in chain S [auth K].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Large ribosomal subunit protein uL29
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Large ribosomal subunit protein uL29. Showing 1 copy in chain Q [auth H].

PF01199
Domain description: Ribosomal protein L34e
Occurring in:
  1. Large ribosomal subunit protein eL34
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01199 (Ribosomal protein L34e) in Large ribosomal subunit protein eL34. Showing 1 copy in chain O [auth F].

PF14374
Domain description: 60S ribosomal protein L4 C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF14374 (60S ribosomal protein L4 C-terminal domain) in Large ribosomal subunit protein uL4. Showing 1 copy in chain M [auth D].

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4. Showing 1 copy in chain M [auth D].

PF01779
Domain description: Ribosomal L29e protein family
Occurring in:
  1. Large ribosomal subunit protein eL29
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01779 (Ribosomal L29e protein family) in Large ribosomal subunit protein eL29. Showing 1 copy in chain L [auth C].

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Large ribosomal subunit protein uL3
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Large ribosomal subunit protein uL3. Showing 1 copy in chain K [auth B].

PF00687
Domain description: Ribosomal protein L1p/L10e family
Occurring in:
  1. Large ribosomal subunit protein uL1
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF00687 (Ribosomal protein L1p/L10e family) in Large ribosomal subunit protein uL1. Showing 1 copy in chain J [auth A].

PF12171
Domain description: Zinc-finger double-stranded RNA-binding
Occurring in:
  1. Zinc finger protein 593
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF12171 (Zinc-finger double-stranded RNA-binding) in Zinc finger protein 593. Showing 1 copy in chain I [auth 9].

PF01246
Domain description: Ribosomal protein L24e
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01246 (Ribosomal protein L24e) in Probable ribosome biogenesis protein RLP24. Showing 1 copy in chain G [auth 7].

PF01912
Domain description: eIF-6 family
Occurring in:
  1. Eukaryotic translation initiation factor 6
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01912 (eIF-6 family) in Eukaryotic translation initiation factor 6. Showing 1 copy in chain F [auth 6].

PF08155
Domain description: NOGCT (NUC087) domain
Occurring in:
  1. GTP-binding protein 4
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF08155 (NOGCT (NUC087) domain) in GTP-binding protein 4. Showing 1 copy in chain D [auth 4].

PF06858
Domain description: Nucleolar GTP-binding protein 1 (NOG1)
Occurring in:
  1. GTP-binding protein 4
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF06858 (Nucleolar GTP-binding protein 1 (NOG1)) in GTP-binding protein 4. Showing 1 copy in chain D [auth 4].

PF17835
Domain description: NOG1 N-terminal helical domain
Occurring in:
  1. GTP-binding protein 4
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF17835 (NOG1 N-terminal helical domain) in GTP-binding protein 4. Showing 1 copy in chain D [auth 4].

PF21192
Domain description: NMD3 OB-fold domain
Occurring in:
  1. 60S ribosomal export protein NMD3

PF21193
Domain description: NMD3 SH3 domain
Occurring in:
  1. 60S ribosomal export protein NMD3

PF04981
Domain description: NMD3 family
Occurring in:
  1. 60S ribosomal export protein NMD3
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF04981 (NMD3 family) in 60S ribosomal export protein NMD3. Showing 1 copy in chain C [auth 3].

PF01926
Domain description: 50S ribosome-binding GTPase
Occurring in:
  1. Nucleolar GTP-binding protein 2
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF01926 (50S ribosome-binding GTPase) in Nucleolar GTP-binding protein 2. Showing 1 copy in chain A [auth 1] (this domain is out of the observed residue ranges!).

PF08153
Domain description: NGP1NT (NUC091) domain
Occurring in:
  1. Nucleolar GTP-binding protein 2
The deposited structure of PDB entry 6lu8 contains 1 copy of Pfam domain PF08153 (NGP1NT (NUC091) domain) in Nucleolar GTP-binding protein 2. Showing 1 copy in chain A [auth 1].

Rfam RNA families (Rfam)
RF02543
Domain description: Eukaryotic large subunit ribosomal RNA
Occurring in:
  1. 28S ribosomal RNA
The deposited structure of PDB entry 6lu8 contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in 28S ribosomal RNA. Showing 1 copy in chain B [auth 2].

RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. 5S ribosomal RNA
The deposited structure of PDB entry 6lu8 contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in 5S ribosomal RNA. Showing 1 copy in chain E [auth 5].

RF00002
Domain description: 5.8S ribosomal RNA
Occurring in:
  1. 5.8S ribosomal RNA
The deposited structure of PDB entry 6lu8 contains 1 copy of Rfam domain RF00002 (5.8S ribosomal RNA) in 5.8S ribosomal RNA. Showing 1 copy in chain H [auth 8].

InterPro InterPro annotations
IPR005485
Domain description: Large ribosomal subunit protein uL18 eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR001921
Domain description: Large ribosomal subunit protein eL8
Occurring in:
  1. Large ribosomal subunit protein eL8
IPR002769
Domain description: Translation initiation factor IF6
Occurring in:
  1. Eukaryotic translation initiation factor 6
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL14
  2. Large ribosomal subunit protein eL21
  3. Large ribosomal subunit protein uL24
  4. Large ribosomal subunit protein eL27
  5. Large ribosomal subunit protein uL2
  6. Large ribosomal subunit protein eL6
IPR008195
Domain description: Large ribosomal subunit protein eL34
Occurring in:
  1. Large ribosomal subunit protein eL34
IPR006073
Domain description: GTP binding domain
Occurring in:
  1. Nucleolar GTP-binding protein 2
  2. GTP-binding protein 4
IPR000054
Domain description: Large ribosomal subunit protein eL31
Occurring in:
  1. Large ribosomal subunit protein eL31
IPR005824
Domain description: KOW
Occurring in:
  1. Large ribosomal subunit protein uL24
  2. Large ribosomal subunit protein eL27
IPR005756
Domain description: Large ribosomal subunit protein uL24, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein eL14
  2. Large ribosomal subunit protein uL24
  3. Large ribosomal subunit protein uL2
  4. Large ribosomal subunit protein eL6
IPR036789
Domain description: Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR018492
Domain description: Ribosomal protein eL8/Nhp2 family
Occurring in:
  1. Large ribosomal subunit protein eL8
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8
IPR027417
Domain description: P-loop containing nucleoside triphosphate hydrolase
Occurring in:
  1. Nucleolar GTP-binding protein 2
  2. GTP-binding protein 4
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR001780
Domain description: Large ribosomal subunit protein eL33
Occurring in:
  1. Large ribosomal subunit protein eL33
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR001515
Domain description: Large ribosomal subunit protein eL32
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR000196
Domain description: Large ribosomal subunit protein eL19 domain
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR005721
Domain description: Large ribosomal subunit protein uL22, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR002674
Domain description: Large ribosomal subunit protein eL43
Occurring in:
  1. Large ribosomal subunit protein eL43
IPR000552
Domain description: Large ribosomal subunit protein eL42
Occurring in:
  1. Large ribosomal subunit protein eL42
IPR000439
Domain description: Large ribosomal subunit protein eL15
Occurring in:
  1. Large ribosomal subunit protein eL15
IPR001380
Domain description: Large ribosomal subunit protein eL13
Occurring in:
  1. Large ribosomal subunit protein eL13
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein eL37
  2. Large ribosomal subunit protein eL42
  3. Large ribosomal subunit protein eL43
IPR000509
Domain description: Large ribosomal subunit protein eL36
Occurring in:
  1. Large ribosomal subunit protein eL36
IPR000988
Domain description: Large ribosomal subunit protein eL24-related
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
IPR018784
Domain description: Learning associated protein 18-like
Occurring in:
  1. Protein LLP homolog
IPR000915
Domain description: Large ribosomal subunit protein eL6
Occurring in:
  1. Large ribosomal subunit protein eL6
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR023621
Domain description: Large ribosomal subunit protein eL31 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL31
IPR001141
Domain description: Large ribosomal subunit protein eL27
Occurring in:
  1. Large ribosomal subunit protein eL27
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR002671
Domain description: Large ribosomal subunit protein eL22
Occurring in:
  1. Large ribosomal subunit protein eL22
IPR001147
Domain description: Large ribosomal subunit protein eL21
Occurring in:
  1. Large ribosomal subunit protein eL21
IPR021138
Domain description: Large ribosomal subunit protein eL20, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein eL20
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL15
  2. Large ribosomal subunit protein uL23
IPR021346
Domain description: Translation machinery-associated protein 16
Occurring in:
  1. Translation machinery-associated protein 16
IPR023626
Domain description: Large ribosomal subunit protein eL39 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR000077
Domain description: Large ribosomal subunit protein eL39
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR002675
Domain description: Large ribosomal subunit protein eL38
Occurring in:
  1. Large ribosomal subunit protein eL38
IPR022803
Domain description: Large ribosomal subunit protein uL5 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR002132
Domain description: Large ribosomal subunit protein uL5
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR001569
Domain description: Large ribosomal subunit protein eL37
Occurring in:
  1. Large ribosomal subunit protein eL37
IPR011331
Domain description: Large ribosomal subunit protein eL37/eL43
Occurring in:
  1. Large ribosomal subunit protein eL37
  2. Large ribosomal subunit protein eL43
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein uL15
  2. Large ribosomal subunit protein eL18
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL15
  2. Large ribosomal subunit protein eL18
IPR020040
Domain description: Large ribosomal subunit protein uL6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR000702
Domain description: Large ribosomal subunit protein uL6-like
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR022991
Domain description: Large ribosomal subunit protein eL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL30
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR002673
Domain description: Large ribosomal subunit protein eL29
Occurring in:
  1. Large ribosomal subunit protein eL29
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
  2. Large ribosomal subunit protein eL33
IPR028364
Domain description: Ribosomal protein uL1/ribosomal biogenesis protein
Occurring in:
  1. Large ribosomal subunit protein uL1
IPR013087
Domain description: Zinc finger C2H2-type
Occurring in:
  1. Zinc finger protein 593
IPR025607
Domain description: Large ribosomal subunit protein uL18, C-terminal, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR018038
Domain description: Large ribosomal subunit protein uL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR035808
Domain description: Large ribosomal subunit protein uL30, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR005998
Domain description: Large ribosomal subunit protein uL30, eukaryotic
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR012988
Domain description: Large ribosomal subunit protein uL30, N-terminal, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR039699
Domain description: Large ribosomal subunit protein uL30
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR041997
Domain description: Large ribosomal subunit protein eL6, KOW domain
Occurring in:
  1. Large ribosomal subunit protein eL6
IPR005568
Domain description: Large ribosomal subunit protein uL6, N-terminal
Occurring in:
  1. Large ribosomal subunit protein eL6
IPR018266
Domain description: Large ribosomal subunit protein eL33, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL33
IPR038661
Domain description: Large ribosomal subunit protein eL33 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL33
IPR022671
Domain description: Large ribosomal subunit protein uL2, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR014726
Domain description: Large ribosomal subunit protein uL2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR023672
Domain description: Large ribosomal subunit protein uL2, archaeal-type
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR029004
Domain description: Ribosomal eL28/Mak16
Occurring in:
  1. Large ribosomal subunit protein eL28
IPR002672
Domain description: Large ribosomal subunit protein eL28
Occurring in:
  1. Large ribosomal subunit protein eL28
IPR018263
Domain description: Large ribosomal subunit protein eL32, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR036351
Domain description: Large ribosomal subunit protein eL32 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR020052
Domain description: Large ribosomal subunit protein eL31, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL31
IPR018262
Domain description: Large ribosomal subunit protein eL27, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL27
IPR041991
Domain description: Large ribosomal subunit protein eL27, KOW domain
Occurring in:
  1. Large ribosomal subunit protein eL27
IPR038655
Domain description: Large ribosomal subunit protein eL27 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL27
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR005825
Domain description: Large ribosomal subunit protein uL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR019985
Domain description: Large ribosomal subunit protein uL23
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR005633
Domain description: Large ribosomal subunit protein uL23, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR019972
Domain description: Large ribosomal subunit protein uL14, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR038526
Domain description: Large ribosomal subunit protein eL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL22
IPR018259
Domain description: Large ribosomal subunit protein eL21, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL21
IPR036948
Domain description: Large ribosomal subunit protein eL21 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL21
IPR028877
Domain description: Large ribosomal subunit protein eL20
Occurring in:
  1. Large ribosomal subunit protein eL20
IPR023573
Domain description: Large ribosomal subunit protein eL20 domain
Occurring in:
  1. Large ribosomal subunit protein eL20
IPR023638
Domain description: Large ribosomal subunit protein eL19, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR033935
Domain description: Large ribosomal subunit protein eL19, eukaryotic
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR035970
Domain description: Large ribosomal subunit protein eL19 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR039547
Domain description: Large ribosomal subunit protein eL19
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR015972
Domain description: Large ribosomal subunit protein eL19, domain 1
Occurring in:
  1. Large ribosomal subunit protein eL19
IPR021132
Domain description: Large ribosomal subunit protein eL18, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL18
IPR000039
Domain description: Large ribosomal subunit protein eL18
Occurring in:
  1. Large ribosomal subunit protein eL18
IPR018260
Domain description: Large ribosomal subunit protein uL22, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR023563
Domain description: Large ribosomal subunit protein uL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR005755
Domain description: Large ribosomal subunit protein uL13, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR020925
Domain description: Large ribosomal subunit protein eL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL15
IPR024794
Domain description: Large ribosomal subunit protein eL15 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL15
IPR002784
Domain description: Large ribosomal subunit protein eL14 domain
Occurring in:
  1. Large ribosomal subunit protein eL14
IPR041985
Domain description: Large ribosomal subunit protein eL14, KOW motif
Occurring in:
  1. Large ribosomal subunit protein eL14
IPR039660
Domain description: Large ribosomal subunit protein eL14
Occurring in:
  1. Large ribosomal subunit protein eL14
IPR038356
Domain description: Tma16 superfamily
Occurring in:
  1. Translation machinery-associated protein 16
IPR018256
Domain description: Large ribosomal subunit protein eL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL13
IPR020083
Domain description: Large ribosomal subunit protein eL39, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR038464
Domain description: Large ribosomal subunit protein eL38 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL38
IPR031309
Domain description: Large ribosomal subunit protein uL5, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR020929
Domain description: Large ribosomal subunit protein uL5, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR031310
Domain description: Large ribosomal subunit protein uL5, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR018267
Domain description: Large ribosomal subunit protein eL37, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL37
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR027386
Domain description: Ribosomal uL15, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR038097
Domain description: Large ribosomal subunit protein eL36 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL36
IPR002359
Domain description: Large ribosomal subunit protein uL6, conserved site-2
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR018254
Domain description: Large ribosomal subunit protein uL29, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR045059
Domain description: Large ribosomal subunit protein uL29, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR004037
Domain description: Large ribosomal subunit protein eL8-like, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL8
IPR018065
Domain description: Large ribosomal subunit protein eL34, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL34
IPR000231
Domain description: Large ribosomal subunit protein eL30
Occurring in:
  1. Large ribosomal subunit protein eL30
IPR039109
Domain description: Large ribosomal subunit protein eL30-like
Occurring in:
  1. Large ribosomal subunit protein eL30
IPR025755
Domain description: Large ribosomal subunit protein uL4, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR013000
Domain description: Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR045240
Domain description: Large ribosomal subunit protein uL4, eukaryotic and archaeal type
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR045077
Domain description: Large ribosomal subunit protein uL3, archaeal/eukaryotic-type
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR044892
Domain description: Ribosomal protein L3, domain 3, archaeal-type superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR023673
Domain description: Large ribosomal subunit protein uL1, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL1
IPR016095
Domain description: Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain
Occurring in:
  1. Large ribosomal subunit protein uL1
IPR023674
Domain description: Ribosomal protein uL1-like
Occurring in:
  1. Large ribosomal subunit protein uL1
IPR002143
Domain description: Large ribosomal subunit protein uL1
Occurring in:
  1. Large ribosomal subunit protein uL1
IPR022755
Domain description: Zinc finger, double-stranded RNA binding
Occurring in:
  1. Zinc finger protein 593
IPR003604
Domain description: Matrin/U1-C-like, C2H2-type zinc finger
Occurring in:
  1. Zinc finger protein 593
IPR036236
Domain description: Zinc finger C2H2 superfamily
Occurring in:
  1. Zinc finger protein 593
IPR023442
Domain description: Large ribosomal subunit protein eL24, conserved site
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
IPR011017
Domain description: TRASH domain
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
IPR038630
Domain description: Ribosomal protein L24e/L24 superfamily
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
IPR023438
Domain description: Large ribosomal subunit protein eL24
Occurring in:
  1. Probable ribosome biogenesis protein RLP24
IPR012973
Domain description: NOG, C-terminal
Occurring in:
  1. GTP-binding protein 4
IPR010674
Domain description: Nucleolar GTP-binding protein 1, Rossman-fold domain
Occurring in:
  1. GTP-binding protein 4
IPR031167
Domain description: OBG-type guanine nucleotide-binding (G) domain
Occurring in:
  1. GTP-binding protein 4
IPR005225
Domain description: Small GTP-binding protein domain
Occurring in:
  1. GTP-binding protein 4
IPR041623
Domain description: NOG1, N-terminal helical domain
Occurring in:
  1. GTP-binding protein 4
IPR024926
Domain description: Nucleolar GTP-binding protein 1
Occurring in:
  1. GTP-binding protein 4
IPR007064
Domain description: Nmd3, N-terminal
Occurring in:
  1. 60S ribosomal export protein NMD3
IPR039768
Domain description: Ribosomal export protein Nmd3
Occurring in:
  1. 60S ribosomal export protein NMD3
IPR023179
Domain description: GTP-binding protein, orthogonal bundle domain superfamily
Occurring in:
  1. Nucleolar GTP-binding protein 2
IPR024929
Domain description: Nucleolar GTP-binding protein 2, circularly permuted GTPase motif
Occurring in:
  1. Nucleolar GTP-binding protein 2
IPR030378
Domain description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain
Occurring in:
  1. Nucleolar GTP-binding protein 2
IPR012971
Domain description: Nucleolar GTP-binding protein 2, N-terminal domain
Occurring in:
  1. Nucleolar GTP-binding protein 2

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