6ka6

X-ray diffraction
1.89Å resolution

Crystal structure of plasmodium lysyl-tRNA synthetase in complex with a cladosporin derivative 1

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197782 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysine--tRNA ligase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 516 amino acids
Theoretical weight: 59.78 KDa
Source organism: Plasmodium falciparum NF54
Expression system: Escherichia coli
UniProt:
  • Canonical: W7JP72 (Residues: 15-521; Coverage: 97%)
Gene name: PFNF54_04763
Sequence domains:

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P1
Unit cell:
a: 71.479Å b: 90.202Å c: 100.72Å
α: 76.7° β: 72.91° γ: 80.03°
R-values:
R R work R free
0.193 0.191 0.226
Expression system: Escherichia coli