› 6jjc

Electron Microscopy
2.92Å resolution

Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) semi-empty VLP

Released:
DOI: 10.2210/pdb6jjc/pdb
PDB entry 6jjc coloured by chain, front view.
PDB entry 6jjc coloured by chain, side view.
PDB entry 6jjc coloured by chain, top view.
Source organism: Macrobrachium rosenbergii nodavirus
Entry authors: Chang WH, Wang CH, Lin HH, Lin SY, Chong SC, Wu YY
Related structures: EMD-9706

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172439 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein alpha Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 371 amino acids
Theoretical weight: 41.48 KDa
Source organism: Macrobrachium rosenbergii nodavirus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q15BP6 (Residues: 1-371; Coverage: 100%)

Ligands and Environments

1 bound ligand:
Ligand CA 7 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.92Å
Relevant EMDB volumes: EMD-9706
Expression system: Escherichia coli BL21(DE3)

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