X-ray diffraction
1.26Å resolution

Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis - mutant D285S

Entry authors: Sainz-Polo MA, Grifoll-Romero L, Albesa-Jove D, Planas A, Guerin ME

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Peptidoglycan-N-acetylmuramic acid deacetylase PdaC Chains: A, B
Molecule details ›
Chains: A, B
Length: 212 amino acids
Theoretical weight: 24.49 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
Expression system: Escherichia coli BL21(DE3)
  • Canonical: O34798 (Residues: 270-467; Coverage: 42%)
Gene names: BSU12100, pdaC, yjeA
Sequence domains: Polysaccharide deacetylase

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P212121
Unit cell:
a: 55.42Å b: 61.8Å c: 130.99Å
α: 90° β: 90° γ: 90°
R R work R free
0.161 0.16 0.174
Expression system: Escherichia coli BL21(DE3)