› 6fzn

X-ray diffraction
2.5Å resolution

SMURFP-Y56R mutant in complex with biliverdin

Released:
DOI: 10.2210/pdb6fzn/pdb
PDB entry 6fzn coloured by chain, front view.
PDB entry 6fzn coloured by chain, side view.
PDB entry 6fzn coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Crystal structure of a biliverdin-bound phycobiliprotein: Interdependence of oligomerization and chromophorylation.
Fuenzalida-Werner JP, Janowski R, Mishra K, Weidenfeld I, Niessing D, Ntziachristos V, Stiel AC
J Struct Biol 204 519-522 (2018)
PMID: 30287387

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-166741 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
smURFP Chains: A, B
Molecule details ›
Chains: A, B
Length: 138 amino acids
Theoretical weight: 15.73 KDa
Source organism: synthetic construct
Expression system: Escherichia coli

Ligands and Environments

1 bound ligand:
Ligand 9UY 1 x 9UY
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P21
Unit cell:
a: 42.55Å b: 57.96Å c: 52.11Å
α: 90° β: 105.04° γ: 90°
R-values:
R R work R free
0.215 0.212 0.263
Expression system: Escherichia coli

Quick links

Citations

2 citation in other articles

A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets.
Zahradník et al. (2021)
1 more

2 mentions without citation

Tracking RNA with light: selection, structure, and design of fluorescence turn-on RNA aptamers.
Trachman et al. (2019)
1 more