Function and Biology

Structure of Ryanodine Receptor 1 in nanodiscs in the presence of calcium and ATP

Source organism: Oryctolagus cuniculus
Biochemical function: disordered domain specific binding
Biological process: cellular response to caffeine
Cellular component: ryanodine receptor complex

Sequence families

Pfam Protein families (Pfam)
PF02026
Domain description: RyR domain
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 16 copies of Pfam domain PF02026 (RyR domain) in Ryanodine receptor 1. Showing 4 copies in chain A.

PF00622
Domain description: SPRY domain
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 12 copies of Pfam domain PF00622 (SPRY domain) in Ryanodine receptor 1. Showing 3 copies in chain A.

PF01365
Domain description: RIH domain
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 8 copies of Pfam domain PF01365 (RIH domain) in Ryanodine receptor 1. Showing 2 copies in chain A.

PF00520
Domain description: Ion transport protein
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 4 copies of Pfam domain PF00520 (Ion transport protein) in Ryanodine receptor 1. Showing 1 copy in chain A.

PF06459
Domain description: Ryanodine Receptor TM 4-6
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 4 copies of Pfam domain PF06459 (Ryanodine Receptor TM 4-6) in Ryanodine receptor 1. Showing 1 copy in chain A.

PF08454
Domain description: RyR and IP3R Homology associated
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 4 copies of Pfam domain PF08454 (RyR and IP3R Homology associated) in Ryanodine receptor 1. Showing 1 copy in chain A.

PF21119
Domain description: Ryanodine receptor junctional solenoid repeat
Occurring in:
  1. Ryanodine receptor 1

PF02815
Domain description: MIR domain
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 4 copies of Pfam domain PF02815 (MIR domain) in Ryanodine receptor 1. Showing 1 copy in chain A.

PF08709
Domain description: Inositol 1,4,5-trisphosphate/ryanodine receptor
Occurring in:
  1. Ryanodine receptor 1
The deposited structure of PDB entry 6foo contains 4 copies of Pfam domain PF08709 (Inositol 1,4,5-trisphosphate/ryanodine receptor) in Ryanodine receptor 1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR013333
Domain description: Ryanodine receptor
Occurring in:
  1. Ryanodine receptor 1
IPR016093
Domain description: MIR motif
Occurring in:
  1. Ryanodine receptor 1
IPR003032
Domain description: Ryanodine receptor Ryr
Occurring in:
  1. Ryanodine receptor 1
IPR003877
Domain description: SPRY domain
Occurring in:
  1. Ryanodine receptor 1
IPR013320
Domain description: Concanavalin A-like lectin/glucanase domain superfamily
Occurring in:
  1. Ryanodine receptor 1
IPR043136
Domain description: B30.2/SPRY domain superfamily
Occurring in:
  1. Ryanodine receptor 1
IPR001870
Domain description: B30.2/SPRY domain
Occurring in:
  1. Ryanodine receptor 1
IPR000699
Domain description: RIH domain
Occurring in:
  1. Ryanodine receptor 1
IPR036300
Domain description: Mir domain superfamily
Occurring in:
  1. Ryanodine receptor 1
IPR005821
Domain description: Ion transport domain
Occurring in:
  1. Ryanodine receptor 1
IPR009460
Domain description: Ryanodine Receptor TM 4-6
Occurring in:
  1. Ryanodine receptor 1
IPR011992
Domain description: EF-hand domain pair
Occurring in:
  1. Ryanodine receptor 1
IPR013662
Domain description: RyR/IP3R Homology associated domain
Occurring in:
  1. Ryanodine receptor 1
IPR015925
Domain description: Ryanodine/Inositol 1,4,5-trisphosphate receptor
Occurring in:
  1. Ryanodine receptor 1
IPR035910
Domain description: RyR/IP3 receptor binding core, RIH domain superfamily
Occurring in:
  1. Ryanodine receptor 1
IPR035764
Domain description: Ryanodine receptor, SPRY domain 2
Occurring in:
  1. Ryanodine receptor 1
IPR035761
Domain description: Ryanodine receptor, SPRY domain 1
Occurring in:
  1. Ryanodine receptor 1
IPR014821
Domain description: Inositol 1,4,5-trisphosphate/ryanodine receptor
Occurring in:
  1. Ryanodine receptor 1