6f47

X-ray diffraction
1.35Å resolution

Crystal structure of the catalytic domain of botulinum neurotoxin X

Released:

Function and Biology Details

Reaction catalysed:
Limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevin (also known as neuronal vesicle-associated membrane protein, VAMP), synaptosome-associated protein of 25 kDa (SNAP25) or syntaxin. No detected action on small molecule substrates.
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-144100 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Botulinum neurotoxin X light chain Chain: A
Molecule details ›
Chain: A
Length: 459 amino acids
Theoretical weight: 52.11 KDa
Source organism: Clostridium botulinum
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0DPK1 (Residues: 1-439; Coverage: 34%)
Gene name: CBB2_0680
Sequence domains: Clostridial neurotoxin zinc protease

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P212121
Unit cell:
a: 58.34Å b: 86.732Å c: 93.079Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.145 0.143 0.176
Expression system: Escherichia coli BL21(DE3)