Function and Biology

Handover mechanism of the growing pilus by the bacterial outer membrane usher FimD

Source organism: Escherichia coli
Biochemical function: fimbrial usher porin activity
Biological process: cell adhesion
Cellular component: pilus

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00419
Domain description: Fimbrial protein
Occurring in:
  1. Protein FimF
  2. Type 1 fimbrin D-mannose specific adhesin
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF00419 (Fimbrial protein) in Protein FimF. Showing 1 copy in chain C [auth F].
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF00419 (Fimbrial protein) in Type 1 fimbrin D-mannose specific adhesin. Showing 1 copy in chain E [auth H].

PF09160
Domain description: FimH, mannose binding
Occurring in:
  1. Type 1 fimbrin D-mannose specific adhesin
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF09160 (FimH, mannose binding) in Type 1 fimbrin D-mannose specific adhesin. Showing 1 copy in chain E [auth H].

PF13953
Domain description: PapC C-terminal domain
Occurring in:
  1. Outer membrane usher protein FimD
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF13953 (PapC C-terminal domain) in Outer membrane usher protein FimD. Showing 1 copy in chain B [auth D].

PF00577
Domain description: Outer membrane usher protein
Occurring in:
  1. Outer membrane usher protein FimD
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF00577 (Outer membrane usher protein) in Outer membrane usher protein FimD. Showing 1 copy in chain B [auth D].

PF13954
Domain description: PapC N-terminal domain
Occurring in:
  1. Outer membrane usher protein FimD
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF13954 (PapC N-terminal domain) in Outer membrane usher protein FimD. Showing 1 copy in chain B [auth D].

PF02753
Domain description: Pili assembly chaperone PapD, C-terminal domain
Occurring in:
  1. Chaperone protein FimC
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF02753 (Pili assembly chaperone PapD, C-terminal domain) in Chaperone protein FimC. Showing 1 copy in chain A [auth C].

PF00345
Domain description: Pili and flagellar-assembly chaperone, PapD N-terminal domain
Occurring in:
  1. Chaperone protein FimC
The deposited structure of PDB entry 6e15 contains 1 copy of Pfam domain PF00345 (Pili and flagellar-assembly chaperone, PapD N-terminal domain) in Chaperone protein FimC. Showing 1 copy in chain A [auth C].

InterPro InterPro annotations
IPR001829
Domain description: Pili assembly chaperone, bacterial
Occurring in:
  1. Chaperone protein FimC
IPR008966
Domain description: Adhesion domain superfamily
Occurring in:
  1. Protein FimF
  2. Protein FimG
  3. Type 1 fimbrin D-mannose specific adhesin
IPR036937
Domain description: Fimbrial-type adhesion domain superfamily
Occurring in:
  1. Protein FimF
  2. Protein FimG
  3. Type 1 fimbrin D-mannose specific adhesin
IPR015243
Domain description: FimH, mannose-binding domain
Occurring in:
  1. Type 1 fimbrin D-mannose specific adhesin
IPR000259
Domain description: Fimbrial-type adhesion domain
Occurring in:
  1. Protein FimF
  2. Type 1 fimbrin D-mannose specific adhesin
IPR000015
Domain description: Outer membrane usher protein
Occurring in:
  1. Outer membrane usher protein FimD
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Chaperone protein FimC
IPR025949
Domain description: PapC-like, C-terminal domain
Occurring in:
  1. Outer membrane usher protein FimD
IPR043142
Domain description: PapC-like, C-terminal domain superfamily
Occurring in:
  1. Outer membrane usher protein FimD
IPR042186
Domain description: Outer membrane usher protein FimD, plug domain
Occurring in:
  1. Outer membrane usher protein FimD
IPR018030
Domain description: Fimbrial membrane usher, conserved site
Occurring in:
  1. Outer membrane usher protein FimD
IPR025885
Domain description: PapC, N-terminal domain
Occurring in:
  1. Outer membrane usher protein FimD
IPR037224
Domain description: PapC, N-terminal domain superfamily
Occurring in:
  1. Outer membrane usher protein FimD
IPR016148
Domain description: Pili assembly chaperone, C-terminal
Occurring in:
  1. Chaperone protein FimC
IPR036316
Domain description: Pili assembly chaperone, C-terminal domain superfamily
Occurring in:
  1. Chaperone protein FimC
IPR018046
Domain description: Pili assembly chaperone, conserved site
Occurring in:
  1. Chaperone protein FimC
IPR016147
Domain description: Pili assembly chaperone, N-terminal
Occurring in:
  1. Chaperone protein FimC
IPR008962
Domain description: PapD-like superfamily
Occurring in:
  1. Chaperone protein FimC