› 6dhr

Solution NMR

NMR Solution structure of Rivi3

Released:
DOI: 10.2210/pdb6dhr/pdb
PDB entry 6dhr coloured by chain, ensemble of 20 models, front view.
PDB entry 6dhr coloured by chain, ensemble of 20 models, side view.
PDB entry 6dhr coloured by chain, ensemble of 20 models, top view.
Source organism: Rinorea virgata
Primary publication:
Discovery and Characterization of Cyclotides from Rinorea Species.
Niyomploy P, Chan LY, Harvey PJ, Poth AG, Colgrave ML, Craik DJ
J Nat Prod 81 2512-2520 (2018)
PMID: 30387611

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-105194 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rivi3 Chain: A
Molecule details ›
Chain: A
Length: 29 amino acids
Theoretical weight: 3.14 KDa
Source organism: Rinorea virgata
Expression system: Not provided
UniProt:
  • Canonical: A0A4V8GZR4 (Residues: 1-29; Coverage: 100%)
Sequence domains: Cyclotide family

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 77%
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

3 citation in other articles

Viola "inconspicua" No More: An Analysis of Antibacterial Cyclotides.
Parsley et al. (2019)
2 more

1 mention without citation

Natural antimicrobial peptides as a source of new antiviral agents.
Zakaryan et al. (2021)