6d33

X-ray diffraction
2.5Å resolution

Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans

Released:

Function and Biology Details

Reaction catalysed:
2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Deoxyribose-phosphate aldolase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 224 amino acids
Theoretical weight: 23.39 KDa
Source organism: Bacillus halodurans C-125
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9KD67 (Residues: 1-224; Coverage: 100%)
Gene names: BH1352, deoC, dra
Sequence domains: DeoC/LacD family aldolase

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007 HF
Spacegroup: C2
Unit cell:
a: 240.908Å b: 55.523Å c: 177.706Å
α: 90° β: 128.02° γ: 90°
R-values:
R R work R free
0.206 0.205 0.25
Expression system: Escherichia coli BL21(DE3)