› 6ckh

X-ray diffraction
2.1Å resolution

Manduca sexta Peptidoglycan Recognition Protein-1

Released:
DOI: 10.2210/pdb6ckh/pdb
PDB entry 6ckh coloured by chain, front view.
PDB entry 6ckh coloured by chain, side view.
PDB entry 6ckh coloured by chain, top view.
Source organism: Manduca sexta
Primary publication:
The three-dimensional structure and recognition mechanism of Manduca sexta peptidoglycan recognition protein-1.
Hu Y, Cao X, Li X, Wang Y, Boons GJ, Deng J, Jiang H
Insect Biochem Mol Biol 108 44-52 (2019)
PMID: 30905759

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183146 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peptidoglycan-recognition protein Chain: A
Molecule details ›
Chain: A
Length: 180 amino acids
Theoretical weight: 20.55 KDa
Source organism: Manduca sexta
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q86RS6 (Residues: 21-191; Coverage: 99%)
Sequence domains: N-acetylmuramoyl-L-alanine amidase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2
Unit cell:
a: 63.734Å b: 46.469Å c: 62.363Å
α: 90° β: 103.05° γ: 90°
R-values:
R R work R free
0.19 0.18 0.22
Expression system: Spodoptera frugiperda

Quick links

Citations

5 citation in other articles

Serine Protease Networks Mediate Immune Responses in Extra-Embryonic Tissues of Eggs in the Tobacco Hornworm, Manduca sexta.
Shan et al. (2023)
4 more

1 mention without citation

The three-dimensional structure and recognition mechanism of Manduca sexta peptidoglycan recognition protein-1.
Hu et al. (2019)