6njg

X-ray diffraction
2.35Å resolution

Ubiquitin Variant in Complex with Ubiquitin Interacting Motif

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Vacuolar protein sorting-associated protein 27 Chain: B
Molecule details ›
Chain: B
Length: 24 amino acids
Theoretical weight: 2.82 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Not provided
UniProt:
  • Canonical: P40343 (Residues: 256-278; Coverage: 4%)
Gene names: DID7, GRD11, N2038, SSV17, VPL23, VPS27, VPT27, YNR006W
Sequence domains: Ubiquitin interaction motif
Polyubiquitin-B Chain: C
Molecule details ›
Chain: C
Length: 89 amino acids
Theoretical weight: 9.74 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E DW
Spacegroup: P43212
Unit cell:
a: 44.613Å b: 44.613Å c: 104.343Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.209 0.206 0.244
Expression systems:
  • Not provided
  • Escherichia coli