› 6bya

X-ray diffraction
2.26Å resolution

Crystal structure of LdBPK_091320 with inhibitor bound

Released:
DOI: 10.2210/pdb6bya/pdb
PDB entry 6bya coloured by chain, front view.
PDB entry 6bya coloured by chain, side view.
PDB entry 6bya coloured by chain, top view.
Source organism: Leishmania donovani BPK282A1
Entry authors: Dong A, Lin YH, Loppnau P, Bountra C, Arrowsmith CH, Edwards AM, Hui R, Structural Genomics Consortium (SGC)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104950 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bromo domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 133 amino acids
Theoretical weight: 14.87 KDa
Source organism: Leishmania donovani BPK282A1
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: A0A3Q8I8I6 (Residues: 8-122; Coverage: 18%)
Gene names: CGC21_36735, LDBPK_091320, LdCL_090019600
Sequence domains: Bromodomain
Structure domains: Bromodomain-like

Ligands and Environments

2 bound ligands:
Ligand 2LO 4 x 2LO
Ligand UNX 3 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P41212
Unit cell:
a: 82.615Å b: 82.615Å c: 177.235Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.197 0.195 0.239
Expression system: Escherichia coli BL21

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