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Structure of AbdB/Exd complex bound to a 'Red14' DNA sequence

Source organism: Drosophila melanogaster
Biochemical function: DNA binding
Biological process: regulation of DNA-templated transcription
Cellular component: not assigned

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF05920
Domain description: Homeobox KN domain
Occurring in:
  1. Homeobox protein extradenticle
The deposited structure of PDB entry 5zjq contains 1 copy of Pfam domain PF05920 (Homeobox KN domain) in Homeobox protein extradenticle. Showing 1 copy in chain B.

PF00046
Domain description: Homeodomain
Occurring in:
  1. Homeobox protein abdominal-B
The deposited structure of PDB entry 5zjq contains 1 copy of Pfam domain PF00046 (Homeodomain) in Homeobox protein abdominal-B. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR001356
Domain description: Homeobox domain
Occurring in:
  1. Homeobox protein abdominal-B
  2. Homeobox protein extradenticle
IPR020479
Domain description: Homeobox domain, metazoa
Occurring in:
  1. Homeobox protein abdominal-B
IPR017970
Domain description: Homeobox, conserved site
Occurring in:
  1. Homeobox protein abdominal-B
  2. Homeobox protein extradenticle
IPR009057
Domain description: Homeobox-like domain superfamily
Occurring in:
  1. Homeobox protein abdominal-B
  2. Homeobox protein extradenticle
IPR046333
Domain description: Homeobox protein Hox-A10/abdominal-B-like
Occurring in:
  1. Homeobox protein abdominal-B

Structure domain

CATH CATH domain
1.10.10.60
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Homeodomain-like
Occurring in:
  1. Homeobox protein abdominal-B
  2. Homeobox protein extradenticle
The deposited structure of PDB entry 5zjq contains 1 copy of CATH domain 1.10.10.60 (Arc Repressor Mutant, subunit A) in Homeobox protein abdominal-B. Showing 1 copy in chain A.
The deposited structure of PDB entry 5zjq contains 1 copy of CATH domain 1.10.10.60 (Arc Repressor Mutant, subunit A) in Homeobox protein extradenticle. Showing 1 copy in chain B.

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