› › Structure analysis

Crystal Structure of AtERF96 with GCC-box

X-ray diffraction
1.76Å resolution
PDB entry 5wx9 coloured by chain, front view.
PDB entry 5wx9 coloured by chain, side view.
PDB entry 5wx9 coloured by chain, top view.
Source organism: Arabidopsis thaliana
Assembly composition:
hetero trimer (preferred)
Entry contents: 1 distinct polypeptide molecule
2 distinct DNA molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Assembly Name: Ethylene-responsive transcription factor ERF096 and DNA
hide full assembly name
Multimeric state: hetero trimer
Accessible surface area: 11472.06 Å2
Buried surface area: 3803.16 Å2
Dissociation area: 1,059.79 Å2
Dissociation energy (ΔGdiss): 7.05 kcal/mol
Dissociation entropy (TΔSdiss): 9.92 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-119367

Macromolecules

Ethylene-responsive transcription factor ERF096
Chain: A
Length: 131 amino acids
Theoretical weight: 14.36 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9LSX0 (Residues: 1-131; Coverage: 100%)
Gene names: At5g43410, ERF096, MWF20.11
Pfam: AP2 domain
InterPro:
Ethylene-responsive transcription factor ERF096 in PDB entry 5wx9, assembly 1, front view.
Ethylene-responsive transcription factor ERF096 in PDB entry 5wx9, assembly 1, side view.
Ethylene-responsive transcription factor ERF096 in PDB entry 5wx9, assembly 1, top view.
Molecule details ›

Search similar proteins

DNA chain B
Name: GCC-box motif
Representative chains: B
Source organism: Arabidopsis thaliana [3702]
Expression system: synthetic construct [32630]
Length: 11 nucleotides
Theoretical weight: 3.32 KDa
GCC-box motif in PDB entry 5wx9, assembly 1, front view.
GCC-box motif in PDB entry 5wx9, assembly 1, side view.
GCC-box motif in PDB entry 5wx9, assembly 1, top view.
Molecule details ›

Search similar DNA

DNA chain C
Name: GCC-box motif
Representative chains: C
Source organism: Arabidopsis thaliana [3702]
Expression system: synthetic construct [32630]
Length: 11 nucleotides
Theoretical weight: 3.39 KDa
GCC-box motif in PDB entry 5wx9, assembly 1, front view.
GCC-box motif in PDB entry 5wx9, assembly 1, side view.
GCC-box motif in PDB entry 5wx9, assembly 1, top view.
Molecule details ›

Search similar DNA

Quick links