› 5wsp

X-ray diffraction
1.5Å resolution

Crystal structure of DNA3 duplex

Released:
DOI: 10.2210/pdb5wsp/pdb
PDB 5wsp coloured by chain and viewed from the front.
PDB 5wsp coloured by chain and viewed from the side.
PDB 5wsp coloured by chain and viewed from the top.
Source organism: unidentified
Entry authors: Gan JH, Liu HH

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*GP*GP*TP*CP*GP*TP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.42 KDa
Source organism: unidentified
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand SR 1 x SR
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P43212
Unit cell:
a: 42.471Å b: 42.471Å c: 25.147Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.185 0.196
Expression system: Not provided

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Citations

1 review citation

A survey of recent unusual high-resolution DNA structures provoked by mismatches, repeats and ligand binding.
Satange et al. (2018)
11 other articles