› 5svv

X-ray diffraction
2.1Å resolution

Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis

Released:
DOI: 10.2210/pdb5svv/pdb
PDB entry 5svv coloured by chain, front view.
PDB entry 5svv coloured by chain, side view.
PDB entry 5svv coloured by chain, top view.
Source organism: Arabidopsis thaliana
Primary publication:
Kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis.
Pudasaini A, Shim JS, Song YH, Shi H, Kiba T, Somers DE, Imaizumi T, Zoltowski BD
Elife 6 (2017)
PMID: 28244872

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188218 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Adagio protein 1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 137 amino acids
Theoretical weight: 15.41 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q94BT6 (Residues: 29-165; Coverage: 23%)
Gene names: ADO1, At5g57360, FKL2, LKP1, MSF19.2, ZTL
Sequence domains: PAS domain
Structure domains: PAS domain

Ligands and Environments

3 bound ligands:
Ligand FMN 4 x FMN
Ligand ACT 3 x ACT
Ligand GOL 2 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F1
Spacegroup: P3121
Unit cell:
a: 85.427Å b: 85.427Å c: 198.775Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.165 0.163 0.2
Expression system: Escherichia coli

Quick links

Citations

8 review citations

Hot topic: Thermosensing in plants.
Hayes et al. (2021)
7 more

3 mentions without citation

Kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis.
Pudasaini et al. (2017)
2 more