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Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis

Source organism: Mycolicibacterium smegmatis MC2 155
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribonucleoprotein complex

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Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6
The deposited structure of PDB entry 5o60 contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6. Showing 2 copies in chain H [auth G].

PF01197
Domain description: Ribosomal protein L31
Occurring in:
  1. Large ribosomal subunit protein bL31
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01197 (Ribosomal protein L31) in Large ribosomal subunit protein bL31. Showing 1 copy in chain HA [auth g].

PF00444
Domain description: Ribosomal protein L36
Occurring in:
  1. Large ribosomal subunit protein bL36
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00444 (Ribosomal protein L36) in Large ribosomal subunit protein bL36. Showing 1 copy in chain GA [auth f].

PF01632
Domain description: Ribosomal protein L35
Occurring in:
  1. Large ribosomal subunit protein bL35
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01632 (Ribosomal protein L35) in Large ribosomal subunit protein bL35. Showing 1 copy in chain FA [auth e].

PF00468
Domain description: Ribosomal protein L34
Occurring in:
  1. Large ribosomal subunit protein bL34
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00468 (Ribosomal protein L34) in Large ribosomal subunit protein bL34. Showing 1 copy in chain EA [auth d].

PF00471
Domain description: Ribosomal protein L33
Occurring in:
  1. Large ribosomal subunit protein bL33A
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00471 (Ribosomal protein L33) in Large ribosomal subunit protein bL33A. Showing 1 copy in chain DA [auth c].

PF01783
Domain description: Ribosomal L32p protein family
Occurring in:
  1. Large ribosomal subunit protein bL32
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01783 (Ribosomal L32p protein family) in Large ribosomal subunit protein bL32. Showing 1 copy in chain CA [auth b].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Large ribosomal subunit protein uL30. Showing 1 copy in chain BA [auth a].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Large ribosomal subunit protein uL29
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Large ribosomal subunit protein uL29. Showing 1 copy in chain AA [auth Z].

PF00830
Domain description: Ribosomal L28 family
Occurring in:
  1. Large ribosomal subunit protein bL28
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00830 (Ribosomal L28 family) in Large ribosomal subunit protein bL28. Showing 1 copy in chain Z [auth Y].

PF01016
Domain description: Ribosomal L27 protein
Occurring in:
  1. Large ribosomal subunit protein bL27
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01016 (Ribosomal L27 protein) in Large ribosomal subunit protein bL27. Showing 1 copy in chain Y [auth X].

PF14693
Domain description: Ribosomal protein TL5, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL25
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF14693 (Ribosomal protein TL5, C-terminal domain) in Large ribosomal subunit protein bL25. Showing 1 copy in chain X [auth W].

PF01386
Domain description: Ribosomal L25p family
Occurring in:
  1. Large ribosomal subunit protein bL25
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01386 (Ribosomal L25p family) in Large ribosomal subunit protein bL25. Showing 1 copy in chain X [auth W].

PF17136
Domain description: Ribosomal proteins 50S L24/mitochondrial 39S L24
Occurring in:
  1. Large ribosomal subunit protein uL24
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF17136 (Ribosomal proteins 50S L24/mitochondrial 39S L24) in Large ribosomal subunit protein uL24. Showing 1 copy in chain W [auth V].

PF00467
Domain description: KOW motif
Occurring in:
  1. Large ribosomal subunit protein uL24
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein uL24. Showing 1 copy in chain W [auth V].

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23. Showing 1 copy in chain V [auth U].

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Large ribosomal subunit protein uL22
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Large ribosomal subunit protein uL22. Showing 1 copy in chain U [auth T].

PF00829
Domain description: Ribosomal prokaryotic L21 protein
Occurring in:
  1. Large ribosomal subunit protein bL21
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00829 (Ribosomal prokaryotic L21 protein) in Large ribosomal subunit protein bL21. Showing 1 copy in chain T [auth S].

PF00453
Domain description: Ribosomal protein L20
Occurring in:
  1. Large ribosomal subunit protein bL20
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00453 (Ribosomal protein L20) in Large ribosomal subunit protein bL20. Showing 1 copy in chain S [auth R].

PF01245
Domain description: Ribosomal protein L19
Occurring in:
  1. Large ribosomal subunit protein bL19
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01245 (Ribosomal protein L19) in Large ribosomal subunit protein bL19. Showing 1 copy in chain R [auth Q].

PF00861
Domain description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00861 (Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast) in Large ribosomal subunit protein uL18. Showing 1 copy in chain Q [auth P].

PF01196
Domain description: Ribosomal protein L17
Occurring in:
  1. Large ribosomal subunit protein bL17
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01196 (Ribosomal protein L17) in Large ribosomal subunit protein bL17. Showing 1 copy in chain P [auth O].

PF00252
Domain description: Ribosomal protein L16p/L10e
Occurring in:
  1. Large ribosomal subunit protein uL16
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00252 (Ribosomal protein L16p/L10e) in Large ribosomal subunit protein uL16. Showing 1 copy in chain O [auth N].

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15. Showing 1 copy in chain N [auth M].

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Large ribosomal subunit protein uL14. Showing 1 copy in chain M [auth L].

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Large ribosomal subunit protein uL13
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Large ribosomal subunit protein uL13. Showing 1 copy in chain L [auth K].

PF00298
Domain description: Ribosomal protein L11, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00298 (Ribosomal protein L11, RNA binding domain) in Large ribosomal subunit protein uL11. Showing 1 copy in chain K [auth J].

PF03946
Domain description: Ribosomal protein L11, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF03946 (Ribosomal protein L11, N-terminal domain) in Large ribosomal subunit protein uL11. Showing 1 copy in chain K [auth J].

PF00466
Domain description: Ribosomal protein L10
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00466 (Ribosomal protein L10) in Large ribosomal subunit protein uL10. Showing 1 copy in chain J [auth I].

PF03948
Domain description: Ribosomal protein L9, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL9
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF03948 (Ribosomal protein L9, C-terminal domain) in Large ribosomal subunit protein bL9. Showing 1 copy in chain I [auth H].

PF01281
Domain description: Ribosomal protein L9, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL9
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF01281 (Ribosomal protein L9, N-terminal domain) in Large ribosomal subunit protein bL9. Showing 1 copy in chain I [auth H].

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in Large ribosomal subunit protein uL5. Showing 1 copy in chain G [auth F].

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in Large ribosomal subunit protein uL5. Showing 1 copy in chain G [auth F].

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4. Showing 1 copy in chain F [auth E].

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Large ribosomal subunit protein uL3
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Large ribosomal subunit protein uL3. Showing 1 copy in chain E [auth D].

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain D [auth C].

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5o60 contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2. Showing 1 copy in chain D [auth C].

Rfam RNA families (Rfam)
RF02541
Domain description: Bacterial large subunit ribosomal RNA
Occurring in:
  1. 23S ribosomal RNA
The deposited structure of PDB entry 5o60 contains 1 copy of Rfam domain RF02541 (Bacterial large subunit ribosomal RNA) in 23S ribosomal RNA. Showing 1 copy in chain B [auth A].

RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. 5S ribosomal RNA
The deposited structure of PDB entry 5o60 contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in 5S ribosomal RNA. Showing 1 copy in chain C [auth B].

InterPro InterPro annotations
IPR005813
Domain description: Large ribosomal subunit protein bL20
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR002150
Domain description: Large ribosomal subunit protein bL31 type A/B
Occurring in:
  1. Large ribosomal subunit protein bL31
IPR001684
Domain description: Large ribosomal subunit protein bL27
Occurring in:
  1. Large ribosomal subunit protein bL27
IPR001857
Domain description: Large ribosomal subunit protein bL19
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR000114
Domain description: Large ribosomal subunit protein uL16, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR001706
Domain description: Large ribosomal subunit protein bL35
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR005996
Domain description: Large ribosomal subunit protein uL30, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR019906
Domain description: Large ribosomal subunit protein uL6, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR001705
Domain description: Large ribosomal subunit protein bL33
Occurring in:
  1. Large ribosomal subunit protein bL33A
IPR000456
Domain description: Large ribosomal subunit protein bL17
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR000911
Domain description: Ribosomal protein uL11
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR002677
Domain description: Large ribosomal subunit protein bL32
Occurring in:
  1. Large ribosomal subunit protein bL32
IPR003256
Domain description: Large ribosomal subunit protein uL24
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR036789
Domain description: Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR013005
Domain description: Large ribosomal subunit protein uL4-like
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR019927
Domain description: Large ribosomal subunit protein uL3, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL2
  2. Large ribosomal subunit protein bL19
  3. Large ribosomal subunit protein uL24
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR000473
Domain description: Large ribosomal subunit protein bL36
Occurring in:
  1. Large ribosomal subunit protein bL36
IPR037229
Domain description: Large ribosomal subunit protein bL35 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR000271
Domain description: Large ribosomal subunit protein bL34
Occurring in:
  1. Large ribosomal subunit protein bL34
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein bL32
  2. Large ribosomal subunit protein bL33A
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR034704
Domain description: Large ribosomal subunit protein bL28/bL31-like superfamily
Occurring in:
  1. Large ribosomal subunit protein bL28
  2. Large ribosomal subunit protein bL31
IPR001383
Domain description: Large ribosomal subunit protein bL28, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR029751
Domain description: Large ribosomal subunit protein bL25, L25 domain
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR001021
Domain description: Ribosomal protein bL25, long-form
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR005824
Domain description: KOW
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR005727
Domain description: Large ribosomal subunit protein uL22, bacterial/chloroplast-type
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR001787
Domain description: Large ribosomal subunit protein bL21
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR035566
Domain description: Ribosomal protein bL20, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR004389
Domain description: Large ribosomal subunit protein uL18, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR005484
Domain description: Large ribosomal subunit protein uL18
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR020798
Domain description: Large ribosomal subunit protein uL16, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR036920
Domain description: Large ribosomal subunit protein uL16 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR005749
Domain description: Large ribosomal subunit protein uL15, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR036769
Domain description: Large ribosomal subunit protein uL11, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR036796
Domain description: Large ribosomal subunit protein uL11, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR047865
Domain description: Large ribosomal subunit protein uL10, bacterial type
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR043141
Domain description: Large ribosomal subunit protein uL10-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR036791
Domain description: Large ribosomal subunit protein bL9, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020594
Domain description: Large ribosomal subunit protein bL9, bacteria/chloroplast
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020070
Domain description: Large ribosomal subunit protein bL9, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020040
Domain description: Large ribosomal subunit protein uL6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR000702
Domain description: Large ribosomal subunit protein uL6-like
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR002132
Domain description: Large ribosomal subunit protein uL5
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR022803
Domain description: Large ribosomal subunit protein uL5 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein uL2
  2. Large ribosomal subunit protein uL24
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR005880
Domain description: Large ribosomal subunit protein uL2, bacterial/organellar-type
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR042105
Domain description: Large ribosomal subunit protein bL31 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL31
IPR027491
Domain description: Large ribosomal subunit protein bL31 type A
Occurring in:
  1. Large ribosomal subunit protein bL31
IPR035977
Domain description: Large ribosomal subunit protein bL36 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL36
IPR018265
Domain description: Large ribosomal subunit protein bL35, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR021137
Domain description: Large ribosomal subunit protein bL35-like
Occurring in:
  1. Large ribosomal subunit protein bL35
IPR020939
Domain description: Large ribosomal subunit protein bL34, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL34
IPR018264
Domain description: Large ribosomal subunit protein bL33, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL33A
IPR038584
Domain description: Large ribosomal subunit protein bL33 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL33A
IPR018038
Domain description: Large ribosomal subunit protein uL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR018254
Domain description: Large ribosomal subunit protein uL29, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR026569
Domain description: Large ribosomal subunit protein bL28
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR037147
Domain description: Large ribosomal subunit protein bL28 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL28
IPR018261
Domain description: Large ribosomal subunit protein bL27, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL27
IPR020057
Domain description: Large ribosomal subunit protein bL25, beta domain
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR037121
Domain description: Large ribosomal subunit protein bL25, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR011035
Domain description: Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR020056
Domain description: Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL25
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR005825
Domain description: Large ribosomal subunit protein uL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL24
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR018260
Domain description: Large ribosomal subunit protein uL22, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR047867
Domain description: Large ribosomal subunit protein uL22, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL22
IPR018258
Domain description: Large ribosomal subunit protein bL21, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR036164
Domain description: Large ribosomal subunit protein bL21-like superfamily
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR028909
Domain description: Large ribosomal subunit protein bL21-like
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR018257
Domain description: Large ribosomal subunit protein bL19, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR038657
Domain description: Large ribosomal subunit protein bL19 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL19
IPR047859
Domain description: Large ribosomal subunit protein bL17, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR036373
Domain description: Large ribosomal subunit protein bL17 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL17
IPR016180
Domain description: Large ribosomal subunit protein uL16 domain
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR047873
Domain description: Large ribosomal subunit protein uL16
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR019972
Domain description: Large ribosomal subunit protein uL14, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR005745
Domain description: Large ribosomal subunit protein uL14, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR005823
Domain description: Large ribosomal subunit protein uL13, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR020785
Domain description: Large ribosomal subunit protein uL11, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR020783
Domain description: Large ribosomal subunit protein uL11, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR020784
Domain description: Large ribosomal subunit protein uL11, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR006519
Domain description: Large ribosomal subunit protein uL11, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL11
IPR002363
Domain description: Large ribosomal subunit protein uL10, conserved site, bacteria
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR022973
Domain description: Large ribosomal subunit protein uL10, bacterial
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR001790
Domain description: Large ribosomal subunit protein uL10
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR020069
Domain description: Large ribosomal subunit protein bL9, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR036935
Domain description: Large ribosomal subunit protein bL9, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR009027
Domain description: Large ribosomal subunit protein bL9/RNase H1, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR000244
Domain description: Large ribosomal subunit protein bL9
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR002358
Domain description: Large ribosomal subunit protein uL6, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL6
IPR031309
Domain description: Large ribosomal subunit protein uL5, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR031310
Domain description: Large ribosomal subunit protein uL5, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR020930
Domain description: Large ribosomal subunit protein uL5, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL5
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR022671
Domain description: Large ribosomal subunit protein uL2, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR014726
Domain description: Large ribosomal subunit protein uL2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2

Structure domains

CATH CATH domains
1.10.287.3980
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Helix Hairpins
Homology: Helix Hairpins
Occurring in:
  1. Large ribosomal subunit protein bL34
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 1.10.287.3980 (Helix Hairpins) in Large ribosomal subunit protein bL34. Showing 1 copy in chain EA [auth d].
2.20.28.120
Class: Mainly Beta
Architecture: Single Sheet
Topology: Rubrerythrin, domain 2
Homology: Ribosomal protein L33
Occurring in:
  1. Large ribosomal subunit protein bL33A
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 2.20.28.120 (Rubrerythrin, domain 2) in Large ribosomal subunit protein bL33A. Showing 1 copy in chain DA [auth c].
3.30.1390.20
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Ribosomal Protein L30; Chain: A,
Homology: Ribosomal protein L30, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.30.1390.20 (Ribosomal Protein L30; Chain: A,) in Large ribosomal subunit protein uL30. Showing 1 copy in chain BA [auth a].
3.30.70.330
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.30.70.330 (Alpha-Beta Plaits) in Large ribosomal subunit protein uL23. Showing 1 copy in chain V [auth U].
3.90.470.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Ribosomal Protein L22; Chain A
Homology: Ribosomal protein L22/L17
Occurring in:
  1. Large ribosomal subunit protein uL22
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.90.470.10 (Ribosomal Protein L22; Chain A) in Large ribosomal subunit protein uL22. Showing 1 copy in chain U [auth T].
3.30.420.100
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Nucleotidyltransferase; domain 5
Homology: Nucleotidyltransferase; domain 5
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.30.420.100 (Nucleotidyltransferase; domain 5) in Large ribosomal subunit protein uL18. Showing 1 copy in chain Q [auth P].
3.90.1170.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Aldehyde Oxidoreductase; domain 3
Homology: Ribosomal protein L10e/L16
Occurring in:
  1. Large ribosomal subunit protein uL16
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.90.1170.10 (Aldehyde Oxidoreductase; domain 3) in Large ribosomal subunit protein uL16. Showing 1 copy in chain O [auth N].
2.40.150.20
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Ribosomal Protein L14
Homology: Ribosomal protein L14
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 2.40.150.20 (Ribosomal Protein L14) in Large ribosomal subunit protein uL14. Showing 1 copy in chain M [auth L].
1.10.10.250
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Ribosomal protein L11, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 1.10.10.250 (Arc Repressor Mutant, subunit A) in Large ribosomal subunit protein uL11. Showing 1 copy in chain K [auth J].
3.30.1550.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Ribosomal protein L11, N-terminal domain
Homology: Ribosomal protein L11/L12, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.30.1550.10 (Ribosomal protein L11, N-terminal domain) in Large ribosomal subunit protein uL11. Showing 1 copy in chain K [auth J].
3.30.70.1730
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 3.30.70.1730 (Alpha-Beta Plaits) in Large ribosomal subunit protein uL10. Showing 1 copy in chain J [auth I].
4.10.950.10
Class: Few Secondary Structures
Architecture: Irregular
Topology: Ribosomal protein L2; domain 3
Homology: Ribosomal protein L2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 4.10.950.10 (Ribosomal protein L2; domain 3) in Large ribosomal subunit protein uL2. Showing 1 copy in chain D [auth C].
2.40.50.140
Class: Mainly Beta
Architecture: Beta Barrel
Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P)
Homology: Nucleic acid-binding proteins
Occurring in:
  1. Large ribosomal subunit protein uL2
The deposited structure of PDB entry 5o60 contains 1 copy of CATH domain 2.40.50.140 (OB fold (Dihydrolipoamide Acetyltransferase, E2P)) in Large ribosomal subunit protein uL2. Showing 1 copy in chain D [auth C].

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