X-ray diffraction
2.1Å resolution

The crystal structure of DfoJ, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen Erwinia amylovora


Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Putative decarboxylase involved in desferrioxamine biosynthesis Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 519 amino acids
Theoretical weight: 56.95 KDa
Source organism: Erwinia amylovora CFBP1430
Expression system: Escherichia coli
  • Canonical: D4I245 (Residues: 1-517; Coverage: 100%)
Gene names: EAMY_3238, dfoJ
Sequence domains: Pyridoxal-dependent decarboxylase conserved domain
Structure domains:

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ELETTRA BEAMLINE 5.2R
Spacegroup: P32
Unit cell:
a: 269.791Å b: 269.791Å c: 56.194Å
α: 90° β: 90° γ: 120°
R R work R free
0.166 0.165 0.187
Expression system: Escherichia coli