› 5n80

X-ray diffraction
1.92Å resolution

glycosyltransferase LPS biosynthesis in complex with UDP

Released:
DOI: 10.2210/pdb5n80/pdb
PDB 5n80 coloured by chain and viewed from the front.
PDB 5n80 coloured by chain and viewed from the side.
PDB 5n80 coloured by chain and viewed from the top.
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Entry authors: Zhang Z, Ashworth GJ

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipopolysaccharide 1,6-galactosyltransferase Chain: A
Molecule details ›
Chain: A
Length: 360 amino acids
Theoretical weight: 41.01 KDa
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q06994 (Residues: 1-359; Coverage: 100%)
Gene names: STM3719, rfaB, waaB
Sequence domains: Glycosyl transferases group 1

Ligands and Environments

1 bound ligand:
Ligand UDP 1 x UDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P43212
Unit cell:
a: 104.44Å b: 104.44Å c: 89.64Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.241 0.239 0.271
Expression system: Escherichia coli BL21

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