› 5n0g

X-ray diffraction
1.57Å resolution

Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA

Released:
DOI: 10.2210/pdb5n0g/pdb
PDB 5n0g coloured by chain and viewed from the front.
PDB 5n0g coloured by chain and viewed from the side.
PDB 5n0g coloured by chain and viewed from the top.
Source organism: Rhodobacter capsulatus SB 1003
Entry authors: Nemoto-Smith EH, Lawrence AD, Brown DG, Warren MJ

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CbiC domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 208 amino acids
Theoretical weight: 21.86 KDa
Source organism: Rhodobacter capsulatus SB 1003
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: D5AV08 (Residues: 2-209; Coverage: 100%)
Gene names: RCAP_rcc02046, cobH
Sequence domains: Precorrin-8X methylmutase
Structure domains: Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase

Ligands and Environments

2 bound ligands:
Ligand 8F5 1 x 8F5
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: C2
Unit cell:
a: 71.23Å b: 66.63Å c: 48.92Å
α: 90° β: 99.03° γ: 90°
R-values:
R R work R free
0.175 0.172 0.238
Expression system: Escherichia coli BL21

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