PDBe 5mv5

Electron Microscopy
3.1Å resolution

Structure of deformed wing virus, a honeybee pathogen

Released:
Source organism: Deformed wing virus
Primary publication:
Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A. (2017)
PMID: 28270616
Related structures: EMD-3574

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero 180-mer (preferred)
hetero trimer
hetero 15-mer
hetero 18-mer
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
VP1 Chain: A
Molecule details ›
Chain: A
Length: 258 amino acids
Theoretical weight: 28.68 KDa
Source organism: Deformed wing virus
UniProt:
  • Canonical: L0CTV4 (Residues: 902-1159; Coverage: 9%)
Sequence domains: CRPV capsid protein like
VP2 Chain: B
Molecule details ›
Chain: B
Length: 253 amino acids
Theoretical weight: 28.36 KDa
Source organism: Deformed wing virus
UniProt:
  • Canonical: Q7TG18 (Residues: 212-464; Coverage: 9%)
Sequence domains: picornavirus capsid protein
VP3 Chain: C
Molecule details ›
Chain: C
Length: 416 amino acids
Theoretical weight: 46.7 KDa
Source organism: Deformed wing virus
UniProt:
  • Canonical: Q7TG18 (Residues: 486-901; Coverage: 14%)
Sequence domains: picornavirus capsid protein

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-3574