› 5lsn

Solution NMR

SINEB2 element of the long non-coding RNA activator of translation AS Uchl1

Released:
DOI: 10.2210/pdb5lsn/pdb
PDB entry 5lsn coloured by chain, ensemble of 10 models, front view.
PDB entry 5lsn coloured by chain, ensemble of 10 models, side view.
PDB entry 5lsn coloured by chain, ensemble of 10 models, top view.
Source organism: Mus musculus
Primary publication:
Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1.
Podbevšek P, Fasolo F, Bon C, Cimatti L, Reißer S, Carninci P, Bussi G, Zucchelli S, Plavec J, Gustincich S
Sci Rep 8 3189 (2018)
PMID: 29453387

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196952 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (29-MER) Chain: A
Molecule details ›
Chain: A
Length: 29 nucleotides
Theoretical weight: 9.31 KDa
Source organism: Mus musculus
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 26%
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

7 review citations

From Junk to Function: LncRNAs in CNS Health and Disease.
Policarpo et al. (2021)
6 more

2 mentions without citation

Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1.
Podbevšek et al. (2018)
1 more